RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
CCDC40-208ENST00000572270 VTI1AQ96AJ9 217 aa16.03■□□□□ 0.16
CCDC40-208ENST00000572270 LENG1Q96BZ8 264 aaPredicted RBP16.03■□□□□ 0.16
CCDC40-208ENST00000572270 NEUROD6Q96NK8 337 aa16.03■□□□□ 0.16
CCDC40-208ENST00000572270 MYH1P12882 1939 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 ELP1O95163 1332 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 SYNRGQ9UMZ2 1314 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 RABGGTBP53611 331 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 KCNA10Q16322 511 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 ABCB5Q2M3G0 1257 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 CERKLQ49MI3 558 aaPredicted RBP16.02■□□□□ 0.16
CCDC40-208ENST00000572270 HLA-CQ95604 372 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 UIMC1Q96RL1 719 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 MTCH2Q9Y6C9 303 aa16.02■□□□□ 0.16
CCDC40-208ENST00000572270 TRANK1O15050 2925 aa16.02■□□□□ 0.15
CCDC40-208ENST00000572270 PPP4CP60510 307 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 TATDN1Q6P1N9 297 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 OTOP2Q7RTS6 562 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 MMP19Q99542 508 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 COPRSQ9NQ92 184 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 PCDHA11Q9Y5I1 949 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 SLC4A7Q9Y6M7 1214 aa16.01■□□□□ 0.15
CCDC40-208ENST00000572270 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 ZNF865P0CJ78 1059 aaPredicted RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 TAL1P17542 331 aaPredicted RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 POU3F3P20264 500 aaPredicted RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 ARID4AP29374 1257 aaPredicted RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 CYP2C18P33260 490 aa16■□□□□ 0.15
CCDC40-208ENST00000572270 NHLH1Q02575 133 aa16■□□□□ 0.15
CCDC40-208ENST00000572270 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
CCDC40-208ENST00000572270 MRPL50Q8N5N7 158 aaKnown RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
CCDC40-208ENST00000572270 KLHDC9Q8NEP7 349 aa16■□□□□ 0.15
CCDC40-208ENST00000572270 SERPINB13Q9UIV8 391 aa16■□□□□ 0.15
CCDC40-208ENST00000572270 ARVCFO00192 962 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 SLC25A27O95847 323 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 MYOGP15173 224 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 CDK7P50613 346 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 TFCP2Q12800 502 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 FAM184BQ9ULE4 1060 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 HDAC5Q9UQL6 1122 aa15.99■□□□□ 0.15
CCDC40-208ENST00000572270 DIS3Q9Y2L1 958 aaKnown RBP15.99■□□□□ 0.15
CCDC40-208ENST00000572270 PRRC2BQ5JSZ5 2229 aaKnown RBP15.99■□□□□ 0.15
CCDC40-208ENST00000572270 ZBBXA8MT70 800 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 PGK2P07205 417 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-208ENST00000572270 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 MCAMP43121 646 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 KCTD2Q14681 263 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 FAM126BQ8IXS8 530 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 EHD4Q9H223 541 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 KCNH6Q9H252 994 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 SPC25Q9HBM1 224 aa15.98■□□□□ 0.15
CCDC40-208ENST00000572270 RFXAPO00287 272 aa15.97■□□□□ 0.15
CCDC40-208ENST00000572270 FLOT1O75955 427 aa15.97■□□□□ 0.15
CCDC40-208ENST00000572270 ASGR1P07306 291 aa15.97■□□□□ 0.15
CCDC40-208ENST00000572270 CST5P28325 142 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-208ENST00000572270 DSG3P32926 999 aa15.97■□□□□ 0.15
CCDC40-208ENST00000572270 USP5P45974 858 aa15.97■□□□□ 0.15
CCDC40-208ENST00000572270 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-208ENST00000572270 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-208ENST00000572270 HIPK3Q9H422 1215 aa15.97■□□□□ 0.15
CCDC40-208ENST00000572270 DUSP11O75319 330 aaKnown RBP15.96■□□□□ 0.15
CCDC40-208ENST00000572270 ATP2A2P16615 1042 aaKnown RBP15.96■□□□□ 0.15
CCDC40-208ENST00000572270 ZNF792Q3KQV3 632 aa15.96■□□□□ 0.15
CCDC40-208ENST00000572270 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
CCDC40-208ENST00000572270 ADGRA1Q86SQ6 560 aa15.96■□□□□ 0.15
CCDC40-208ENST00000572270 TTC6Q86TZ1 520 aa15.96■□□□□ 0.15
CCDC40-208ENST00000572270 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
CCDC40-208ENST00000572270 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
CCDC40-208ENST00000572270 CERS4Q9HA82 394 aa15.96■□□□□ 0.15
CCDC40-208ENST00000572270 ZHX1Q9UKY1 873 aaPredicted RBP15.96■□□□□ 0.15
CCDC40-208ENST00000572270 MYADML2A6NDP7 307 aa15.95■□□□□ 0.14
CCDC40-208ENST00000572270 CA3P07451 260 aa15.95■□□□□ 0.14
CCDC40-208ENST00000572270 ALADP13716 330 aa15.95■□□□□ 0.14
CCDC40-208ENST00000572270 SEPT2Q15019 361 aa15.95■□□□□ 0.14
CCDC40-208ENST00000572270 KRT40Q6A162 431 aa15.95■□□□□ 0.14
CCDC40-208ENST00000572270 FBXL18Q96ME1 805 aa15.95■□□□□ 0.14
CCDC40-208ENST00000572270 COL11A1P12107 1806 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-208ENST00000572270 WDFY4Q6ZS81 3184 aa15.94■□□□□ 0.14
CCDC40-208ENST00000572270 MPHOSPH10O00566 681 aaKnown RBP15.94■□□□□ 0.14
CCDC40-208ENST00000572270 CD4P01730 458 aa15.94■□□□□ 0.14
CCDC40-208ENST00000572270 CCL23P55773 120 aa15.94■□□□□ 0.14
CCDC40-208ENST00000572270 DYNLL1P63167 89 aaKnown RBP15.94■□□□□ 0.14
CCDC40-208ENST00000572270 CERS3Q8IU89 383 aa15.94■□□□□ 0.14
CCDC40-208ENST00000572270 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
CCDC40-208ENST00000572270 CD320Q9NPF0 282 aa15.94■□□□□ 0.14
CCDC40-208ENST00000572270 A0A1W2PRG0 241 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-208ENST00000572270 GUCY1A2P33402 732 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 SHMT1P34896 483 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 TMEM132BQ14DG7 1078 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 GNASQ5JWF2 1037 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 GJD3Q8N144 294 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
CCDC40-208ENST00000572270 PARP14Q460N5 1801 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms