RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 KLRC3Q07444 240 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 TRIM32Q13049 653 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 PLS1Q14651 629 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 MORN1Q5T089 497 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 TRIB2Q92519 343 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 SHISA4Q96DD7 197 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
LITAF-208ENST00000571627 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 NMT2O60551 498 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 TTLL1O95922 423 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 HMGCRP04035 888 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 USP6NLQ92738 828 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 SPATC1LQ9H0A9 340 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 TOMM22Q9NS69 142 aa17.26■□□□□ 0.35
LITAF-208ENST00000571627 ZNFX1Q9P2E3 1918 aaKnown RBP17.25■□□□□ 0.35
LITAF-208ENST00000571627 HIP1O00291 1037 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 RANBP6O60518 1105 aaKnown RBP17.25■□□□□ 0.35
LITAF-208ENST00000571627 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
LITAF-208ENST00000571627 CCL14Q16627 93 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 RRP12Q5JTH9 1297 aaKnown RBP17.25■□□□□ 0.35
LITAF-208ENST00000571627 MB21D1Q8N884 522 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 MKL1Q969V6 931 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 IL25Q9H293 177 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 IL17RBQ9NRM6 502 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 ZNF236Q9UL36 1845 aa17.25■□□□□ 0.35
LITAF-208ENST00000571627 ORC4O43929 436 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 GJB1P08034 283 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 PTPREP23469 700 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 RGS2P41220 211 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 TBC1D10CQ8IV04 446 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 APBA2Q99767 749 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 IVNS1ABPQ9Y6Y0 642 aa17.24■□□□□ 0.35
LITAF-208ENST00000571627 SLC15A5A6NIM6 579 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 FGRP09769 529 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 XRCC5P13010 732 aaKnown RBP17.23■□□□□ 0.35
LITAF-208ENST00000571627 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
LITAF-208ENST00000571627 ERCC3P19447 782 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 MAP2K5Q13163 448 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 GRB14Q14449 540 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 NCAPG2Q86XI2 1143 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 NKX2-3Q8TAU0 364 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 U2AF1L4Q8WU68 220 aaKnown RBP17.23■□□□□ 0.35
LITAF-208ENST00000571627 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 DEFB118Q96PH6 123 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 SLF1Q9BQI6 1058 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 ADAMTS5Q9UNA0 930 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
LITAF-208ENST00000571627 VWA5AO00534 786 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 GJA8P48165 433 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 ERICH6BQ5W0A0 696 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 SLFN13Q68D06 897 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 RASGRP2Q7LDG7 609 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 SKAP1Q86WV1 359 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 GMCL1P1Q8NEA9 526 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 REPS2Q8NFH8 660 aa17.22■□□□□ 0.35
LITAF-208ENST00000571627 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■□□□ 13.1
LITAF-208ENST00000571627 PAK6Q9NQU5 681 aaPredicted RBP17.22■□□□□ 0.35
LITAF-208ENST00000571627 ISY1Q9ULR0 285 aaKnown RBP17.22■□□□□ 0.35
LITAF-208ENST00000571627 NEDD4P46934 1319 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 PLXNA1Q9UIW2 1896 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
LITAF-208ENST00000571627 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 SHCBP1Q8NEM2 672 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 NPLOC4Q8TAT6 608 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 ZNF214Q9UL59 606 aaPredicted RBP17.21■□□□□ 0.35
LITAF-208ENST00000571627 SYNPO2Q9UMS6 1093 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 FRMPD3Q5JV73 1810 aa17.21■□□□□ 0.35
LITAF-208ENST00000571627 ADORA2AP29274 412 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 KIFC2Q96AC6 838 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 MROH8Q9H579 483 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 HMX1Q9NP08 348 aaPredicted RBP17.2■□□□□ 0.34
LITAF-208ENST00000571627 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 RPTORQ8N122 1335 aa17.2■□□□□ 0.34
LITAF-208ENST00000571627 ZNF213O14771 459 aa17.19■□□□□ 0.34
LITAF-208ENST00000571627 SGPL1O95470 568 aa17.19■□□□□ 0.34
LITAF-208ENST00000571627 BMP3P12645 472 aa17.19■□□□□ 0.34
LITAF-208ENST00000571627 MCCP23508 829 aa17.19■□□□□ 0.34
LITAF-208ENST00000571627 CHMLP26374 656 aa17.19■□□□□ 0.34
LITAF-208ENST00000571627 CACNB2Q08289 660 aaPredicted RBP17.19■□□□□ 0.34
LITAF-208ENST00000571627 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
LITAF-208ENST00000571627 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
LITAF-208ENST00000571627 TMEM232C9JQI7 657 aa17.18■□□□□ 0.34
LITAF-208ENST00000571627 COBLO75128 1261 aa17.18■□□□□ 0.34
LITAF-208ENST00000571627 TFRCP02786 760 aaKnown RBP17.18■□□□□ 0.34
LITAF-208ENST00000571627 HOXC6P09630 235 aa17.18■□□□□ 0.34
LITAF-208ENST00000571627 STAT3P40763 770 aa17.18■□□□□ 0.34
LITAF-208ENST00000571627 SLC1A4P43007 532 aa17.18■□□□□ 0.34
LITAF-208ENST00000571627 SLC4A3P48751 1232 aa17.18■□□□□ 0.34
LITAF-208ENST00000571627 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms