RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 SEC62Q99442 399 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-204ENST00000570324 MMP19Q99542 508 aa10.64□□□□□ -0.71
NPLOC4-204ENST00000570324 NYAP2Q9P242 653 aa10.64□□□□□ -0.71
NPLOC4-204ENST00000570324 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
NPLOC4-204ENST00000570324 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
NPLOC4-204ENST00000570324 F5H6K3 240 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 COPB2P35606 906 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 STAT3P40763 770 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 KLRC3Q07444 240 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 AAMPQ13685 434 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 TMEM132BQ14DG7 1078 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 ZMYM1Q5SVZ6 1142 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 EVI5LQ96CN4 794 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 SLF1Q9BQI6 1058 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 EPB41L4AQ9HCS5 686 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 FBXO28Q9NVF7 368 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 FLRT1Q9NZU1 646 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 DDX20Q9UHI6 824 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 PPP1R9AQ9ULJ8 1098 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 HTTP42858 3142 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 ROBO3Q96MS0 1386 aa10.63□□□□□ -0.71
NPLOC4-204ENST00000570324 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 VWA5AO00534 786 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 ZBED4O75132 1171 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 TTLL1O95922 423 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 PPARAQ07869 468 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 HDAC1Q13547 482 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 OLFML2BQ68BL8 750 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 LHX8Q68G74 356 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 RIOX2Q8IUF8 465 aa10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 PRPF38AQ8NAV1 312 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 RWDD1Q9H446 243 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 ZMYND8Q9ULU4 1186 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-204ENST00000570324 COBLO75128 1261 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 NDUFB10O96000 172 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 FXR1P51114 621 aaKnown RBP eCLIP10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 PDE1AP54750 535 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 TFAP4Q01664 338 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 IKQ13123 557 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 PPP4R3BQ5MIZ7 849 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 CPXCR1Q8N123 301 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 ARRDC4Q8NCT1 418 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 KIFC2Q96AC6 838 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 DDX11Q96FC9 970 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 CEP95Q96GE4 821 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 TEX13BQ9BXU2 312 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 SENP6Q9GZR1 1112 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 TOMM22Q9NS69 142 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 A0A0G2JMZ2 1700 aa10.61□□□□□ -0.71
NPLOC4-204ENST00000570324 RLFQ13129 1914 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 TSPY2A6NKD2 308 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 KBTBD13C9JR72 458 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 SEPT4O43236 478 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 CYBAP13498 195 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 SYN1P17600 705 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 FAM47AQ5JRC9 791 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 SLFN13Q68D06 897 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 SNRNP48Q6IEG0 339 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 NEDD1Q8NHV4 660 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 RILPL2Q969X0 211 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 MAML3Q96JK9 1138 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 LNPKQ9C0E8 428 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 HELLSQ9NRZ9 838 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 MTMR4Q9NYA4 1195 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 PRKAG2Q9UGJ0 569 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 FEM1BQ9UK73 627 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 ADAMTS5Q9UNA0 930 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 COL11A1P12107 1806 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 ZNF236Q9UL36 1845 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 MYH4Q9Y623 1939 aa10.6□□□□□ -0.71
NPLOC4-204ENST00000570324 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 DNM1LO00429 736 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 RANBP6O60518 1105 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 PGK2P07205 417 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 COL6A1P12109 1028 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 BMP3P12645 472 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 CTDSPL2Q05D32 466 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 PRAMEF19Q5SWL8 479 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 TRPV1Q8NER1 839 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 MKL1Q969V6 931 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 ZNF214Q9UL59 606 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 SYNPO2Q9UMS6 1093 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
NPLOC4-204ENST00000570324 PFASO15067 1338 aa10.58□□□□□ -0.71
NPLOC4-204ENST00000570324 SALL3Q9BXA9 1300 aa10.58□□□□□ -0.71
NPLOC4-204ENST00000570324 GREB1LQ9C091 1923 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms