RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 DLL1O00548 723 aa18.68■□□□□ 0.58
NME3-211ENST00000568561 WDR46O15213 610 aaKnown RBP18.68■□□□□ 0.58
NME3-211ENST00000568561 RAD21O60216 631 aa18.68■□□□□ 0.58
NME3-211ENST00000568561 C20orf194Q5TEA3 1177 aa18.68■□□□□ 0.58
NME3-211ENST00000568561 AMOTL1Q8IY63 956 aa18.68■□□□□ 0.58
NME3-211ENST00000568561 STK11IPQ8N1F8 1099 aa18.68■□□□□ 0.58
NME3-211ENST00000568561 MAML3Q96JK9 1138 aa18.68■□□□□ 0.58
NME3-211ENST00000568561 LBHD1Q9BQE6 289 aaPredicted RBP18.68■□□□□ 0.58
NME3-211ENST00000568561 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
NME3-211ENST00000568561 KBTBD13C9JR72 458 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 SEPT4O43236 478 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 PGK2P07205 417 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 UBE3CQ15386 1083 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 FAM47AQ5JRC9 791 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 CTR9Q6PD62 1173 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 ARRDC4Q8NCT1 418 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 FERMT2Q96AC1 680 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 CCDC17Q96LX7 622 aa18.67■□□□□ 0.58
NME3-211ENST00000568561 PRDM5Q9NQX1 630 aaPredicted RBP18.67■□□□□ 0.58
NME3-211ENST00000568561 MYH4Q9Y623 1939 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 FCER1AP12319 257 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 TRIM60Q495X7 471 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 DDRGK1Q96HY6 314 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 SLC5A4Q9NY91 659 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 PRKAG2Q9UGJ0 569 aa18.66■□□□□ 0.58
NME3-211ENST00000568561 ADCYAP1R1P41586 468 aa18.65■□□□□ 0.58
NME3-211ENST00000568561 TSHZ3Q63HK5 1081 aa18.65■□□□□ 0.58
NME3-211ENST00000568561 SLC39A5Q6ZMH5 540 aa18.65■□□□□ 0.58
NME3-211ENST00000568561 ABRAQ8N0Z2 381 aa18.65■□□□□ 0.58
NME3-211ENST00000568561 MMP19Q99542 508 aa18.65■□□□□ 0.58
NME3-211ENST00000568561 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
NME3-211ENST00000568561 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
NME3-211ENST00000568561 LRRC41Q15345 812 aa18.64■□□□□ 0.57
NME3-211ENST00000568561 LENG1Q96BZ8 264 aaPredicted RBP18.64■□□□□ 0.57
NME3-211ENST00000568561 FAM161BQ96MY7 647 aa18.64■□□□□ 0.57
NME3-211ENST00000568561 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
NME3-211ENST00000568561 RCAN3Q9UKA8 241 aa18.64■□□□□ 0.57
NME3-211ENST00000568561 STXBP5LQ9Y2K9 1186 aa18.64■□□□□ 0.57
NME3-211ENST00000568561 UNC80Q8N2C7 3258 aa18.64■□□□□ 0.57
NME3-211ENST00000568561 VWA5AO00534 786 aa18.63■□□□□ 0.57
NME3-211ENST00000568561 SLC25A27O95847 323 aa18.63■□□□□ 0.57
NME3-211ENST00000568561 TAL1P17542 331 aaPredicted RBP18.63■□□□□ 0.57
NME3-211ENST00000568561 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
NME3-211ENST00000568561 GOPCQ9HD26 462 aa18.63■□□□□ 0.57
NME3-211ENST00000568561 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
NME3-211ENST00000568561 PPP1R9AQ9ULJ8 1098 aa18.63■□□□□ 0.57
NME3-211ENST00000568561 ADAMTS5Q9UNA0 930 aa18.63■□□□□ 0.57
NME3-211ENST00000568561 MCM3APO60318 1980 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 STAT3P40763 770 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 KCTD2Q14681 263 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 SNX17Q15036 470 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 C9orf50Q5SZB4 431 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 SH3RF1Q7Z6J0 888 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 RIOX2Q8IUF8 465 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 GUCD1Q96NT3 240 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
NME3-211ENST00000568561 XPNPEP3Q9NQH7 507 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 PDLIM7Q9NR12 457 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 ECHDC1Q9NTX5 307 aa18.62■□□□□ 0.57
NME3-211ENST00000568561 ZNF214Q9UL59 606 aaPredicted RBP18.62■□□□□ 0.57
NME3-211ENST00000568561 MINDY4BA8MYZ0 360 aa18.61■□□□□ 0.57
NME3-211ENST00000568561 PGK1P00558 417 aa18.61■□□□□ 0.57
NME3-211ENST00000568561 RASA1P20936 1047 aa18.61■□□□□ 0.57
NME3-211ENST00000568561 BADQ92934 168 aa18.61■□□□□ 0.57
NME3-211ENST00000568561 TINF2Q9BSI4 451 aa18.61■□□□□ 0.57
NME3-211ENST00000568561 CHMP4BQ9H444 224 aaKnown RBP18.61■□□□□ 0.57
NME3-211ENST00000568561 TRIM43BA6NCK2 446 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 RARBP10826 455 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 SHHQ15465 462 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 ZNF792Q3KQV3 632 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 OSBP2Q969R2 916 aa18.6■□□□□ 0.57
NME3-211ENST00000568561 TRIM43Q96BQ3 446 aaPredicted RBP18.6■□□□□ 0.57
NME3-211ENST00000568561 EPB41L4AQ9HCS5 686 aaPredicted RBP18.6■□□□□ 0.57
NME3-211ENST00000568561 ROBO3Q96MS0 1386 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 PRDM1O75626 825 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 NDUFB10O96000 172 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 TLE2Q04725 743 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 SNRNP48Q6IEG0 339 aaKnown RBP18.59■□□□□ 0.57
NME3-211ENST00000568561 SLF1Q9BQI6 1058 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 MKNK2Q9HBH9 465 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 PHF24Q9UPV7 400 aa18.59■□□□□ 0.57
NME3-211ENST00000568561 ZNF865P0CJ78 1059 aaPredicted RBP18.58■□□□□ 0.56
NME3-211ENST00000568561 SBK1Q52WX2 424 aa18.58■□□□□ 0.56
NME3-211ENST00000568561 KBTBD3Q8NAB2 608 aa18.58■□□□□ 0.56
NME3-211ENST00000568561 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
NME3-211ENST00000568561 CDH23Q9H251 3354 aa18.58■□□□□ 0.56
NME3-211ENST00000568561 F5H6K3 240 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 M0R2C6 588 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 GPAA1O43292 621 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 ITGB8P26012 769 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 KLRC3Q07444 240 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 APPBP2Q92624 585 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
NME3-211ENST00000568561 NRBP1Q9UHY1 535 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms