RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 STRNO43815 780 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 HOXC6P09630 235 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 TSPY3P0CV98 308 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 TSPY8P0CW00 308 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 ERCC3P19447 782 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 CACNB2Q08289 660 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-215ENST00000568477 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 DPF3Q92784 378 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 CEP95Q96GE4 821 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 MROH8Q9H579 483 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
CMTM3-215ENST00000568477 PLIN4Q96Q06 1357 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 F5H6K3 240 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 NDUFB10O96000 172 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 KLRC3Q07444 240 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 ANKLE1Q8NAG6 615 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 NEDD1Q8NHV4 660 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 MTMR4Q9NYA4 1195 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 SYNPO2Q9UMS6 1093 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
CMTM3-215ENST00000568477 PARP14Q460N5 1801 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 SLC25A27O95847 323 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 TTLL1O95922 423 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 ADORA2AP29274 412 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 TMEM132BQ14DG7 1078 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 MCMDC2Q4G0Z9 681 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 FAM47AQ5JRC9 791 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-215ENST00000568477 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 FLRT1Q9NZU1 646 aa17.15■□□□□ 0.34
CMTM3-215ENST00000568477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.15■□□□□ 0.34
CMTM3-215ENST00000568477 ZNF236Q9UL36 1845 aa17.14■□□□□ 0.34
CMTM3-215ENST00000568477 H0YGN5 161 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 VWA5AO00534 786 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 CCND3P30281 292 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-215ENST00000568477 TFAP4Q01664 338 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 CTDSPL2Q05D32 466 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-215ENST00000568477 ALX1Q15699 326 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 NECAB2Q7Z6G3 386 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 ABRAQ8N0Z2 381 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
CMTM3-215ENST00000568477 NPLOC4Q8TAT6 608 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 MKL1Q969V6 931 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 PAWRQ96IZ0 340 aaKnown RBP17.14■□□□□ 0.33
CMTM3-215ENST00000568477 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 OGDHLQ9ULD0 1010 aa17.14■□□□□ 0.33
CMTM3-215ENST00000568477 FCER1AP12319 257 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 COPB2P35606 906 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 STAT3P40763 770 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 RIOX2Q8IUF8 465 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 GMCL1P1Q8NEA9 526 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 DIS3LQ8TF46 1054 aaKnown RBP17.13■□□□□ 0.33
CMTM3-215ENST00000568477 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 NR2E3Q9Y5X4 410 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 MYH4Q9Y623 1939 aa17.13■□□□□ 0.33
CMTM3-215ENST00000568477 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
CMTM3-215ENST00000568477 CYP2C19P33261 490 aa17.12■□□□□ 0.33
CMTM3-215ENST00000568477 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
CMTM3-215ENST00000568477 OLFML2BQ68BL8 750 aa17.12■□□□□ 0.33
CMTM3-215ENST00000568477 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-215ENST00000568477 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
CMTM3-215ENST00000568477 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
CMTM3-215ENST00000568477 ZNF214Q9UL59 606 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-215ENST00000568477 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
CMTM3-215ENST00000568477 ORC4O43929 436 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 RANBP6O60518 1105 aaKnown RBP17.11■□□□□ 0.33
CMTM3-215ENST00000568477 COBLO75128 1261 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 FGAP02671 866 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
CMTM3-215ENST00000568477 SDSP20132 328 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
CMTM3-215ENST00000568477 KCTD2Q14681 263 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 MMP19Q99542 508 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 TEX13BQ9BXU2 312 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
CMTM3-215ENST00000568477 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-215ENST00000568477 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-215ENST00000568477 ZMYM6O95789 1325 aa17.11■□□□□ 0.33
CMTM3-215ENST00000568477 EVI5O60447 810 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 ZBED4O75132 1171 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 SLC34A2O95436 690 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 CNGA1P29973 690 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 LHX8Q68G74 356 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
CMTM3-215ENST00000568477 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms