RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 UPF3BQ9BZI7 483 aaKnown RBP10.13□□□□□ -0.79
KLHDC4-220ENST00000568338 RNF41Q9H4P4 317 aaPredicted RBP10.13□□□□□ -0.79
KLHDC4-220ENST00000568338 ANAPC4Q9UJX5 808 aa10.13□□□□□ -0.79
KLHDC4-220ENST00000568338 TAF6LQ9Y6J9 622 aa10.13□□□□□ -0.79
KLHDC4-220ENST00000568338 TNPO2O14787 897 aaKnown RBP10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 SLC3A2P08195 630 aaKnown RBP10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 BCRP11274 1271 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 COL9A1P20849 921 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 MCM2P49736 904 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 PPARAQ07869 468 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 DSG2Q14126 1118 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 ARSIQ5FYB1 569 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 FAM109BQ6ICB4 259 aaPredicted RBP10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 CDC42EP5Q6NZY7 148 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 CTR9Q6PD62 1173 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 STOX1Q6ZVD7 989 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 TBC1D10CQ8IV04 446 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 MAPKAPK5Q8IW41 473 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 STAG1Q8WVM7 1258 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 SYMPKQ92797 1274 aaKnown RBP10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 GUCD1Q96NT3 240 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 ZNF341Q9BYN7 854 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.12□□□□□ -0.796e-15■■■■■ 44.9
KLHDC4-220ENST00000568338 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 USP40Q9NVE5 1235 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 MCM9Q9NXL9 1143 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 ROBO3Q96MS0 1386 aa10.12□□□□□ -0.79
KLHDC4-220ENST00000568338 MINDY4BA8MYZ0 360 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 USP17L21D6R901 530 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 CYP2C8P10632 490 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 PCP11498 1178 aaKnown RBP10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 RPS6KB1P23443 525 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 CACNB3P54284 484 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 PICALMQ13492 652 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 IRF5Q13568 498 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 AKNAD1Q5T1N1 836 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 ZNF697Q5TEC3 545 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 TTC14Q96N46 770 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 KRT23Q9C075 422 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 C11orf49Q9H6J7 331 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 PDRG1Q9NUG6 133 aa10.11□□□□□ -0.79
KLHDC4-220ENST00000568338 COL2A1P02458 1487 aaPredicted RBP10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 NEDD4P46934 1319 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 WDR19Q8NEZ3 1342 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 MYH8P13535 1937 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 K7ELQ4 463 aaPredicted RBP10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 POLR3DP05423 398 aaPredicted RBP10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 NT5C2P49902 561 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 ANKRD1Q15327 319 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 MFSD6Q6ZSS7 791 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 DHX32Q7L7V1 743 aaKnown RBP10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 FAM83AQ86UY5 434 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 PLPP6Q8IY26 295 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 MAFAQ8NHW3 353 aaPredicted RBP10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 COA7Q96BR5 231 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 IDI2Q9BXS1 227 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 OSBPL5Q9H0X9 879 aaPredicted RBP10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 KCNH4Q9UQ05 1017 aa10.1□□□□□ -0.79
KLHDC4-220ENST00000568338 CYP2D7A0A087X1C5 515 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 HLA-DOAP06340 250 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 CPA1P15085 419 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 INPP5BP32019 993 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 MCM5P33992 734 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 PDE4BQ07343 736 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 C12orf60Q5U649 245 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 MIGA2Q7L4E1 593 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 TTC6Q86TZ1 520 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 MB21D2Q8IYB1 491 aaPredicted RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 SMCR8Q8TEV9 937 aaPredicted RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 ALDH8A1Q9H2A2 487 aaPredicted RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 DDX4Q9NQI0 724 aaKnown RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 TOMM22Q9NS69 142 aa10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 SAP30BPQ9UHR5 308 aaKnown RBP10.09□□□□□ -0.79
KLHDC4-220ENST00000568338 B4E1Z4 1266 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 CXCL11O14625 94 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 PRC1O43663 620 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 ENTPD3O75355 529 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 HMGCRP04035 888 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 FGRP09769 529 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 CYP2D6P10635 497 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 AK2P54819 239 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 FGD1P98174 961 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 NFIAQ12857 509 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 MOGSQ13724 837 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 RRP12Q5JTH9 1297 aaKnown RBP10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 FKBP1CQ5VVH2 108 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 ESR2Q92731 530 aa10.08□□□□□ -0.8
KLHDC4-220ENST00000568338 DHX36Q9H2U1 1008 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms