RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 NCOA7Q8NI08 942 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 GTF3C2Q8WUA4 911 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-220ENST00000567720 ATG4CQ96DT6 458 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 GMCL1Q96IK5 515 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 RBPJLQ9UBG7 517 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 OTOP1Q7RTM1 612 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 TRIM47Q96LD4 638 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 UBAC1Q9BSL1 405 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
COMMD4-220ENST00000567720 RBBP6Q7Z6E9 1792 aaKnown RBP20.25■□□□□ 0.83
COMMD4-220ENST00000567720 DSG3P32926 999 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 ERVK-24P63145 666 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 COG2Q14746 738 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 SEC23AQ15436 765 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 RNF20Q5VTR2 975 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 TTC14Q96N46 770 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 PPP1R9AQ9ULJ8 1098 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 PLXNA1Q9UIW2 1896 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 SMCHD1A6NHR9 2005 aa20.24■□□□□ 0.83
COMMD4-220ENST00000567720 BMP3P12645 472 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 MCCP23508 829 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 HSPA4P34932 840 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 SAMD1Q6SPF0 538 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-220ENST00000567720 CHST3Q7LGC8 479 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 ANKS1AQ92625 1134 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 SLF1Q9BQI6 1058 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 TRIM17Q9Y577 477 aa20.23■□□□□ 0.83
COMMD4-220ENST00000567720 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
COMMD4-220ENST00000567720 PDHBP11177 359 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 SLC1A4P43007 532 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 PSMC4P43686 418 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 CCDC178Q5BJE1 867 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 KCTD1Q719H9 257 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 PNMA1Q8ND90 353 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 KCNB2Q92953 911 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 EFCC1Q9HA90 598 aa20.22■□□□□ 0.83
COMMD4-220ENST00000567720 SNHG28P0DPA3 235 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 KIF22Q14807 665 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 Q3C1V9 767 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 REPS2Q8NFH8 660 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 GPRC5AQ8NFJ5 357 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 MCOLN1Q9GZU1 580 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 PORCNQ9H237 461 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 HOXC10Q9NYD6 342 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 ISY1Q9ULR0 285 aaKnown RBP20.21■□□□□ 0.83
COMMD4-220ENST00000567720 ADAMTS5Q9UNA0 930 aa20.21■□□□□ 0.83
COMMD4-220ENST00000567720 LCTP09848 1927 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 TMEM232C9JQI7 657 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
COMMD4-220ENST00000567720 STAT2P52630 851 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 FCGRTP55899 365 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 TSGA10IPQ3SY00 556 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 IFIT1BQ5T764 474 aaKnown RBP20.2■□□□□ 0.82
COMMD4-220ENST00000567720 MB21D1Q8N884 522 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 KAT14Q9H8E8 782 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 FEM1BQ9UK73 627 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 FRMPD2Q68DX3 1309 aaPredicted RBP20.2■□□□□ 0.82
COMMD4-220ENST00000567720 BRCA2P51587 3418 aa20.2■□□□□ 0.82
COMMD4-220ENST00000567720 VWA5AO00534 786 aa20.19■□□□□ 0.82
COMMD4-220ENST00000567720 IFIT3O14879 490 aaKnown RBP20.19■□□□□ 0.82
COMMD4-220ENST00000567720 PRC1O43663 620 aa20.19■□□□□ 0.82
COMMD4-220ENST00000567720 FMNL1O95466 1100 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-220ENST00000567720 ZNF543Q08ER8 600 aa20.19■□□□□ 0.82
COMMD4-220ENST00000567720 TMEM132BQ14DG7 1078 aa20.19■□□□□ 0.82
COMMD4-220ENST00000567720 KIFC2Q96AC6 838 aa20.19■□□□□ 0.82
COMMD4-220ENST00000567720 USP26Q9BXU7 913 aa20.19■□□□□ 0.82
COMMD4-220ENST00000567720 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-220ENST00000567720 ZNF214Q9UL59 606 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-220ENST00000567720 TNPO2O14787 897 aaKnown RBP20.18■□□□□ 0.82
COMMD4-220ENST00000567720 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-220ENST00000567720 MCM5P33992 734 aa20.18■□□□□ 0.82
COMMD4-220ENST00000567720 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
COMMD4-220ENST00000567720 C8orf34Q49A92 452 aa20.18■□□□□ 0.82
COMMD4-220ENST00000567720 TMEM67Q5HYA8 995 aa20.18■□□□□ 0.82
COMMD4-220ENST00000567720 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
COMMD4-220ENST00000567720 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
COMMD4-220ENST00000567720 SPATC1LQ9H0A9 340 aa20.18■□□□□ 0.82
COMMD4-220ENST00000567720 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
COMMD4-220ENST00000567720 SH2B2O14492 632 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-220ENST00000567720 PLA2G6O60733 806 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 PRKCZQ05513 592 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 IKQ13123 557 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-220ENST00000567720 KRT32Q14532 448 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 WTAPQ15007 396 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 TTBK2Q6IQ55 1244 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 FAM160B2Q86V87 743 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 TNS4Q8IZW8 715 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms