RNA–Protein interactions for RNA: ENST00000567223.6

SMPD3-209, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-209ENST00000567223 COPB2P35606 906 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 MNX1P50219 401 aaPredicted RBP22.2■■□□□ 1.14
SMPD3-209ENST00000567223 TMEM132BQ14DG7 1078 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 ALX1Q15699 326 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 PPP4R3BQ5MIZ7 849 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 NECAB2Q7Z6G3 386 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 GMCL1P1Q8NEA9 526 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 NEDD1Q8NHV4 660 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 ZMYM6O95789 1325 aa22.2■■□□□ 1.14
SMPD3-209ENST00000567223 F5H6K3 240 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 VWA5AO00534 786 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 TTLL1O95922 423 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 NUCB1Q02818 461 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 KLRC3Q07444 240 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 MFSD14CQ5VZR4 134 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 RIOX2Q8IUF8 465 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 REPS2Q8NFH8 660 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 SLC5A4Q9NY91 659 aa22.19■■□□□ 1.14
SMPD3-209ENST00000567223 ZNF214Q9UL59 606 aaPredicted RBP22.19■■□□□ 1.14
SMPD3-209ENST00000567223 ATP2A1O14983 1001 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 MSCO60682 206 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 FGRP09769 529 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 ADORA2AP29274 412 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 ATP2B2Q01814 1243 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 WDR78Q5VTH9 848 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 LHX8Q68G74 356 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 CHD1LQ86WJ1 897 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 DPF3Q92784 378 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 CEP95Q96GE4 821 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 PAWRQ96IZ0 340 aaKnown RBP22.18■■□□□ 1.14
SMPD3-209ENST00000567223 LNPKQ9C0E8 428 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 FLRT1Q9NZU1 646 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.18■■□□□ 1.14
SMPD3-209ENST00000567223 NR2E3Q9Y5X4 410 aa22.18■■□□□ 1.14
SMPD3-209ENST00000567223 RANBP2P49792 3224 aaKnown RBP22.17■■□□□ 1.14
SMPD3-209ENST00000567223 H0YGN5 161 aa22.17■■□□□ 1.14
SMPD3-209ENST00000567223 NDUFB10O96000 172 aa22.17■■□□□ 1.14
SMPD3-209ENST00000567223 MCMDC2Q4G0Z9 681 aa22.17■■□□□ 1.14
SMPD3-209ENST00000567223 FAM83BQ5T0W9 1011 aa22.17■■□□□ 1.14
SMPD3-209ENST00000567223 NPLOC4Q8TAT6 608 aa22.17■■□□□ 1.14
SMPD3-209ENST00000567223 NBPF3Q9H094 633 aa22.17■■□□□ 1.14
SMPD3-209ENST00000567223 MYH4Q9Y623 1939 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 COL11A1P12107 1806 aaPredicted RBP22.16■■□□□ 1.14
SMPD3-209ENST00000567223 PRDM1O75626 825 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 IGHDP01880 384 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 TSPY8P0CW00 308 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 NOVP48745 357 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 HABP4Q5JVS0 413 aaKnown RBP22.16■■□□□ 1.14
SMPD3-209ENST00000567223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.16■■□□□ 1.14
SMPD3-209ENST00000567223 DPP9Q86TI2 863 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 PRPF38AQ8NAV1 312 aaKnown RBP22.16■■□□□ 1.14
SMPD3-209ENST00000567223 EXOC6Q8TAG9 804 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 SLF1Q9BQI6 1058 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 FBXO28Q9NVF7 368 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 CLIP2Q9UDT6 1046 aa22.16■■□□□ 1.14
SMPD3-209ENST00000567223 DIS3Q9Y2L1 958 aaKnown RBP22.16■■□□□ 1.14
SMPD3-209ENST00000567223 COL6A1P12109 1028 aa22.15■■□□□ 1.14
SMPD3-209ENST00000567223 FCER1AP12319 257 aa22.15■■□□□ 1.14
SMPD3-209ENST00000567223 CCND3P30281 292 aaPredicted RBP22.15■■□□□ 1.14
SMPD3-209ENST00000567223 STAT3P40763 770 aa22.15■■□□□ 1.14
SMPD3-209ENST00000567223 NCAPG2Q86XI2 1143 aa22.15■■□□□ 1.14
SMPD3-209ENST00000567223 FRMPD3Q5JV73 1810 aa22.15■■□□□ 1.14
SMPD3-209ENST00000567223 ORC4O43929 436 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 COBLO75128 1261 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 FDX1P10109 184 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 CYBAP13498 195 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 TFAP4Q01664 338 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 PLS1Q14651 629 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 VPS53Q5VIR6 699 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 CCDC129Q6ZRS4 1044 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 PLEKHM2Q8IWE5 1019 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 DIS3LQ8TF46 1054 aaKnown RBP22.14■■□□□ 1.13
SMPD3-209ENST00000567223 TEX13BQ9BXU2 312 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 NRBP1Q9UHY1 535 aa22.14■■□□□ 1.13
SMPD3-209ENST00000567223 A0A0D9SFI3 127 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 PCP11498 1178 aaKnown RBP22.13■■□□□ 1.13
SMPD3-209ENST00000567223 NT5C2P49902 561 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 OAZ1P54368 228 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 STK11IPQ8N1F8 1099 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 GMCL1Q96IK5 515 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 FAM227BQ96M60 508 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 PRO3102Q9H379 93 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 C11orf49Q9H6J7 331 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 DDX20Q9UHI6 824 aaKnown RBP22.13■■□□□ 1.13
SMPD3-209ENST00000567223 FEM1BQ9UK73 627 aa22.13■■□□□ 1.13
SMPD3-209ENST00000567223 EVI5O60447 810 aa22.12■■□□□ 1.13
SMPD3-209ENST00000567223 PLA2G6O60733 806 aa22.12■■□□□ 1.13
SMPD3-209ENST00000567223 MFAP1P55081 439 aaKnown RBP22.12■■□□□ 1.13
SMPD3-209ENST00000567223 MAML3Q96JK9 1138 aa22.12■■□□□ 1.13
SMPD3-209ENST00000567223 SLC38A10Q9HBR0 1119 aa22.12■■□□□ 1.13
SMPD3-209ENST00000567223 CEP290O15078 2479 aa22.11■■□□□ 1.13
SMPD3-209ENST00000567223 FGAP02671 866 aa22.11■■□□□ 1.13
SMPD3-209ENST00000567223 HSPD1P10809 573 aaKnown RBP22.11■■□□□ 1.13
SMPD3-209ENST00000567223 CYP2C19P33261 490 aa22.11■■□□□ 1.13
SMPD3-209ENST00000567223 MSL3Q8N5Y2 521 aaKnown RBP22.11■■□□□ 1.13
SMPD3-209ENST00000567223 NUP88Q99567 741 aaPredicted RBP22.11■■□□□ 1.13
SMPD3-209ENST00000567223 COLQQ9Y215 455 aaPredicted RBP22.11■■□□□ 1.13
SMPD3-209ENST00000567223 ALPK3Q96L96 1907 aa22.11■■□□□ 1.13
SMPD3-209ENST00000567223 PFASO15067 1338 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms