RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 MFSD6Q6ZSS7 791 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 MOV10L1Q9BXT6 1211 aaKnown RBP22.87■■□□□ 1.25
CCDC113-204ENST00000566498 UNC93B1Q9H1C4 597 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 ISY1Q9ULR0 285 aaKnown RBP22.87■■□□□ 1.25
CCDC113-204ENST00000566498 STX8Q9UNK0 236 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 TACC3Q9Y6A5 838 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 MYH4Q9Y623 1939 aa22.86■■□□□ 1.25
CCDC113-204ENST00000566498 ORC4O43929 436 aa22.86■■□□□ 1.25
CCDC113-204ENST00000566498 XRCC5P13010 732 aaKnown RBP22.86■■□□□ 1.25
CCDC113-204ENST00000566498 PTPREP23469 700 aa22.86■■□□□ 1.25
CCDC113-204ENST00000566498 CHMP4CQ96CF2 233 aa22.86■■□□□ 1.25
CCDC113-204ENST00000566498 IL17RBQ9NRM6 502 aa22.86■■□□□ 1.25
CCDC113-204ENST00000566498 ZMYM6O95789 1325 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 SLC15A5A6NIM6 579 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 NMT2O60551 498 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 HMGCRP04035 888 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 GJB1P08034 283 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 FGRP09769 529 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 AKNAD1Q5T1N1 836 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 SLFN13Q68D06 897 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 NCAPG2Q86XI2 1143 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 NKX2-3Q8TAU0 364 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 RUFY2Q8WXA3 655 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 SLF1Q9BQI6 1058 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 PPP1R9AQ9ULJ8 1098 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 SYNPO2Q9UMS6 1093 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 CTDP1Q9Y5B0 961 aaPredicted RBP22.85■■□□□ 1.25
CCDC113-204ENST00000566498 PLIN4Q96Q06 1357 aa22.85■■□□□ 1.25
CCDC113-204ENST00000566498 VWA5AO00534 786 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 ERCC3P19447 782 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 MAP2K5Q13163 448 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 TMEM132BQ14DG7 1078 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 TRMT44Q8IYL2 757 aaKnown RBP22.84■■□□□ 1.25
CCDC113-204ENST00000566498 PRPF38AQ8NAV1 312 aaKnown RBP22.84■■□□□ 1.25
CCDC113-204ENST00000566498 GMCL1P1Q8NEA9 526 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 USP6NLQ92738 828 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 RNF41Q9H4P4 317 aaPredicted RBP22.84■■□□□ 1.25
CCDC113-204ENST00000566498 MROH8Q9H579 483 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 ADAMTS5Q9UNA0 930 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 RLFQ13129 1914 aa22.84■■□□□ 1.25
CCDC113-204ENST00000566498 PLXNB2O15031 1838 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 STRNO43815 780 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 ZKSCAN1P17029 563 aaPredicted RBP22.83■■□□□ 1.25
CCDC113-204ENST00000566498 CENPQQ7L2Z9 268 aaPredicted RBP22.83■■□□□ 1.25
CCDC113-204ENST00000566498 DPP9Q86TI2 863 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 SHCBP1Q8NEM2 672 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 TRIB2Q92519 343 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 DSCC1Q9BVC3 393 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 CTNNA3Q9UI47 895 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 MTMR7Q9Y216 660 aa22.83■■□□□ 1.25
CCDC113-204ENST00000566498 TFRCP02786 760 aaKnown RBP22.82■■□□□ 1.24
CCDC113-204ENST00000566498 PCP11498 1178 aaKnown RBP22.82■■□□□ 1.24
CCDC113-204ENST00000566498 BMP3P12645 472 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 MCCP23508 829 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 STAT3P40763 770 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 GJA8P48165 433 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 TRIM32Q13049 653 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 IMMTQ16891 758 aaKnown RBP22.82■■□□□ 1.24
CCDC113-204ENST00000566498 KIFC2Q96AC6 838 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 DEFB118Q96PH6 123 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 HMX1Q9NP08 348 aaPredicted RBP22.82■■□□□ 1.24
CCDC113-204ENST00000566498 FEM1BQ9UK73 627 aa22.82■■□□□ 1.24
CCDC113-204ENST00000566498 RBBP6Q7Z6E9 1792 aaKnown RBP22.81■■□□□ 1.24
CCDC113-204ENST00000566498 ZBED4O75132 1171 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 SLC25A27O95847 323 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 CHMLP26374 656 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 SLC4A3P48751 1232 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 IKQ13123 557 aaPredicted RBP22.81■■□□□ 1.24
CCDC113-204ENST00000566498 CCL14Q16627 93 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 U2AF1L4Q8WU68 220 aaKnown RBP22.81■■□□□ 1.24
CCDC113-204ENST00000566498 STAG1Q8WVM7 1258 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 APBA2Q99767 749 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 RPTORQ8N122 1335 aa22.81■■□□□ 1.24
CCDC113-204ENST00000566498 TNRC18O15417 2968 aaPredicted RBP22.8■■□□□ 1.24
CCDC113-204ENST00000566498 SGPL1O95470 568 aa22.8■■□□□ 1.24
CCDC113-204ENST00000566498 SLC1A4P43007 532 aa22.8■■□□□ 1.24
CCDC113-204ENST00000566498 GRB14Q14449 540 aa22.8■■□□□ 1.24
CCDC113-204ENST00000566498 TBC1D10CQ8IV04 446 aa22.8■■□□□ 1.24
CCDC113-204ENST00000566498 ESR2Q92731 530 aa22.8■■□□□ 1.24
CCDC113-204ENST00000566498 NBPF3Q9H094 633 aa22.8■■□□□ 1.24
CCDC113-204ENST00000566498 TMEM232C9JQI7 657 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 FCER1AP12319 257 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 PRKAR2AP13861 404 aaKnown RBP22.79■■□□□ 1.24
CCDC113-204ENST00000566498 ADORA2AP29274 412 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 RIOX2Q8IUF8 465 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 CPXCR1Q8N123 301 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 CHURC1Q8WUH1 139 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC113-204ENST00000566498 TCP11L1Q9NUJ3 509 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 BRCA2P51587 3418 aa22.79■■□□□ 1.24
CCDC113-204ENST00000566498 COL11A1P12107 1806 aaPredicted RBP22.78■■□□□ 1.24
CCDC113-204ENST00000566498 PARP14Q460N5 1801 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 MFSD14CQ5VZR4 134 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 RCSD1Q6JBY9 416 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 NPLOC4Q8TAT6 608 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 GMCL1Q96IK5 515 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 CCDC136Q96JN2 1154 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 IL25Q9H293 177 aa22.78■■□□□ 1.24
CCDC113-204ENST00000566498 PAK6Q9NQU5 681 aaPredicted RBP22.78■■□□□ 1.24
CCDC113-204ENST00000566498 SLC5A4Q9NY91 659 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms