RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	DYNLL2	Q96FJ2	89 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	DNAJC18	Q9H819	358 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	ROBO3	Q96MS0	1386 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279		A0A1W2PQ27	194 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279		A0A1W2PQ64	194 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279		A0A1W2PQD8	194 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	DEXI	O95424	95 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	TYRO3	Q06418	890 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	PPP2R5B	Q15173	497 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	FAM47A	Q5JRC9	791 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	ADAL	Q6DHV7	355 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	CATIP	Q7Z7H3	387 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	FSIP1	Q8NA03	581 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	SLC44A5	Q8NCS7	719 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	GBA2	Q9HCG7	927 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	TAOK2	Q9UL54	1235 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	ABT1	Q9ULW3	272 aa	Known RBP	11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	MRVI1	Q9Y6F6	885 aa		11.7	□□□□□ -0.54
TCF4-231	ENST00000566279	SPTLC2	O15270	562 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	NMT2	O60551	498 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	USP2	O75604	605 aa	Predicted RBP	11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	DDAH1	O94760	285 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	APLP1	P51693	650 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	FAM160A1	Q05DH4	1040 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	PDE4B	Q07343	736 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	FUT2	Q10981	343 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	TROAP	Q12815	778 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	GRM1	Q13255	1194 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	CCDC73	Q6ZRK6	1079 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	CCDC82	Q8N4S0	544 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	MRPS27	Q92552	414 aa	Known RBP	11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	TMEM88B	A6NKF7	163 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	MMP1	P03956	469 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	INPP5B	P32019	993 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	NF2	P35240	595 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	RRP1B	Q14684	758 aa	Known RBP	11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	CERS3	Q8IU89	383 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	CLMN	Q96JQ2	1002 aa		11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	RNF26	Q9BY78	433 aa	Predicted RBP	11.69	□□□□□ -0.54
TCF4-231	ENST00000566279	ATAD5	Q96QE3	1844 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	NPM3	O75607	178 aa	Known RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	CALM1	P0DP23	149 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	CALM2	P0DP24	149 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	CALM3	P0DP25	149 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	GNL2	Q13823	731 aa	Known RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	SLC39A14	Q15043	492 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	SF3A1	Q15459	793 aa	Known RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	SUPT20HL1	Q3ZLR7	823 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	CCDC84	Q86UT8	332 aa	Predicted RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	WRNIP1	Q96S55	665 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	MAP3K14	Q99558	947 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	RBM28	Q9NW13	759 aa	Known RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	KCNJ14	Q9UNX9	436 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	COL2A1	P02458	1487 aa	Predicted RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	TSPY2	A6NKD2	308 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	ESPN	B1AK53	854 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	PLEKHA8P1	O95397	391 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	NT5C2	P49902	561 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	HUNK	P57058	714 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	MKRN3	Q13064	507 aa	Known RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	PTPA	Q15257	358 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	RCSD1	Q6JBY9	416 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	SAPCD2	Q86UD0	394 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	C2orf69	Q8N8R5	385 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	CNKSR2	Q8WXI2	1034 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	SHISA4	Q96DD7	197 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	USP25	Q9UHP3	1055 aa		11.68	□□□□□ -0.54
TCF4-231	ENST00000566279	MYH8	P13535	1937 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	BTBD18	B2RXH4	712 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	CTAGE5	O15320	804 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	PRPF3	O43395	683 aa	Known RBP	11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	GDF11	O95390	407 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	HLA-DOA	P06340	250 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	JAG1	P78504	1218 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	PKN1	Q16512	942 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	HS1BP3	Q53T59	392 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	TMTC3	Q6ZXV5	915 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	NOSTRIN	Q8IVI9	506 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	DIS3L2	Q8IYB7	885 aa	Known RBP	11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	FAM200A	Q8TCP9	573 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	KLRG1	Q96E93	195 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	DHX36	Q9H2U1	1008 aa	Known RBP	11.67	□□□□□ -0.54
TCF4-231	ENST00000566279	PI4KB	Q9UBF8	816 aa		11.67	□□□□□ -0.54
TCF4-231	ENST00000566279		A0A1B0GVL5	298 aa		11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	PPP1R12B	O60237	982 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	KIN	O60870	393 aa	Known RBP	11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	HSPA6	P17066	643 aa		11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	NDUFA8	P51970	172 aa		11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	TFAP4	Q01664	338 aa		11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	SAFB	Q15424	915 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	FOXP1	Q9H334	677 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF4-231	ENST00000566279	IL17RB	Q9NRM6	502 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms