RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 NBPF11Q86T75 865 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 APOBEC3FQ8IUX4 373 aaKnown RBP11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 TMEM87AQ8NBN3 555 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 CCDC12Q8WUD4 166 aaPredicted RBP11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 MKL1Q969V6 931 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 CCDC102AQ96A19 550 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 SYAP1Q96A49 352 aaPredicted RBP11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 LMBRD1Q9NUN5 540 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 SYNPO2Q9UMS6 1093 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 COL4A5P29400 1685 aa11.43□□□□□ -0.58
TUBGCP4-211ENST00000566251 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 KLRF2D3W0D1 207 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 DTNBO60941 627 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 PPFIA3O75145 1194 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 CALML3P27482 149 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 UBE2HP62256 183 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 DSG2Q14126 1118 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 KLHL40Q2TBA0 621 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 KIF4BQ2VIQ3 1234 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 NBPF9Q3BBW0 867 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 USP48Q86UV5 1035 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 PARP9Q8IXQ6 854 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 SPATA32Q96LK8 384 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 ARHGEF10LQ9HCE6 1279 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 SH3GLB2Q9NR46 395 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 SEC63Q9UGP8 760 aaKnown RBP11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 CNPY2Q9Y2B0 182 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 DDX60LQ5H9U9 1706 aaKnown RBP11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
TUBGCP4-211ENST00000566251 ELP1O95163 1332 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 FIBPO43427 364 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 PLEKHA8P1O95397 391 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 MMP1P03956 469 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 SCG2P13521 617 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 ICA1Q05084 483 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 FUT2Q10981 343 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 RASA3Q14644 834 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 TBC1D10BQ4KMP7 808 aaPredicted RBP11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 DCAF15Q66K64 600 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 GALNT17Q6IS24 598 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 DCAF4Q8WV16 495 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 RRP36Q96EU6 259 aaKnown RBP11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 SPZ1Q9BXG8 430 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 FOXP1Q9H334 677 aaPredicted RBP11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 GPRC5DQ9NZD1 345 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 MAD2L2Q9UI95 211 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 PPP2R3BQ9Y5P8 575 aa11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 ZNF646O15015 1829 aaPredicted RBP11.41□□□□□ -0.58
TUBGCP4-211ENST00000566251 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 hCG_1984214I3L0E3 225 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 KRT2P35908 639 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 NLRP5P59047 1200 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 KIF23Q02241 960 aaPredicted RBP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 PFKFB3Q16875 520 aaPredicted RBP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 CMTR1Q8N1G2 835 aaKnown RBP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 ZNF713Q8N859 430 aaPredicted RBP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 TMEM39BQ9GZU3 492 aa11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 TFIP11Q9UBB9 837 aaKnown RBP11.4□□□□□ -0.58
TUBGCP4-211ENST00000566251 CNTNAP1P78357 1384 aa11.4□□□□□ -0.59
TUBGCP4-211ENST00000566251 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 USP17L5A8MUK1 530 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 GH2P01242 217 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 ASNSP08243 561 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 PDHBP11177 359 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 EEF2P13639 858 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 PRELPP51888 382 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 TRAF1Q13077 416 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 SEPT2Q15019 361 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 CCDC96Q2M329 555 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 SUPT20HL1Q3ZLR7 823 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 C9orf131Q5VYM1 1079 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 OTUD7BQ6GQQ9 843 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 DIS3L2Q8IYB7 885 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 KCNG4Q8TDN1 519 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 DNAJC18Q9H819 358 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 ADARB2Q9NS39 739 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 RTEL1Q9NZ71 1219 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 HACL1Q9UJ83 578 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 RCOR1Q9UKL0 485 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 NOL7Q9UMY1 257 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 CEP131Q9UPN4 1083 aa11.39□□□□□ -0.59
TUBGCP4-211ENST00000566251 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
TUBGCP4-211ENST00000566251 FAM196BA6NMK8 535 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms