RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 GRIN2CQ14957 1233 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 TTF1Q15361 905 aaPredicted RBP7.5□□□□□ -1.21
UBE3A-205ENST00000566215 CHST13Q8NET6 341 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 IRF2BPLQ9H1B7 796 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 C19orf67A6NJJ6 358 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 FCER1AP12319 257 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 NAA16Q6N069 864 aaPredicted RBP7.5□□□□□ -1.21
UBE3A-205ENST00000566215 MKL1Q969V6 931 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 RIOK1Q9BRS2 568 aaKnown RBP7.5□□□□□ -1.21
UBE3A-205ENST00000566215 VCPKMTQ9H867 229 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 SYNRGQ9UMZ2 1314 aa7.5□□□□□ -1.21
UBE3A-205ENST00000566215 PITPNM1O00562 1244 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 CTAGE5O15320 804 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 COBLO75128 1261 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 NOVP48745 357 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 TLE2Q04725 743 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 ABCB5Q2M3G0 1257 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
UBE3A-205ENST00000566215 LEXMQ3ZCV2 418 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 ZSCAN29Q8IWY8 852 aaPredicted RBP7.49□□□□□ -1.21
UBE3A-205ENST00000566215 PBX4Q9BYU1 374 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 CABP5Q9NP86 173 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 XPNPEP3Q9NQH7 507 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 ADORA1P30542 326 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 C16orf59Q7L2K0 433 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 MICALL1Q8N3F8 863 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 SLC44A5Q8NCS7 719 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 RPAP3Q9H6T3 665 aaPredicted RBP7.49□□□□□ -1.21
UBE3A-205ENST00000566215 ATP8A2Q9NTI2 1148 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 EPHB4P54760 987 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 SBK1Q52WX2 424 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 SSH1Q8WYL5 1049 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 YTHDC1Q96MU7 727 aaKnown RBP7.49□□□□□ -1.21
UBE3A-205ENST00000566215 ARHGEF10LQ9HCE6 1279 aa7.49□□□□□ -1.21
UBE3A-205ENST00000566215 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 IGKV6D-41A0A0C4DH26 115 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 NCK2O43639 380 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 CERKLQ49MI3 558 aaPredicted RBP7.48□□□□□ -1.21
UBE3A-205ENST00000566215 USP38Q8NB14 1042 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 ABHD16BQ9H3Z7 469 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 NKRFO15226 690 aaKnown RBP eCLIP7.48□□□□□ -1.212e-13■■□□□ 11.6
UBE3A-205ENST00000566215 ADCYAP1R1P41586 468 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 MKRN4PQ13434 485 aaPredicted RBP7.48□□□□□ -1.21
UBE3A-205ENST00000566215 TMEM31Q5JXX7 168 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 GMCL1P1Q8NEA9 526 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 BORCS6Q96GS4 357 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 NYAP2Q9P242 653 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 ZNF214Q9UL59 606 aaPredicted RBP7.48□□□□□ -1.21
UBE3A-205ENST00000566215 PPP1R9AQ9ULJ8 1098 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 IQSEC3Q9UPP2 1182 aaPredicted RBP7.48□□□□□ -1.21
UBE3A-205ENST00000566215 ATP11BQ9Y2G3 1177 aa7.48□□□□□ -1.21
UBE3A-205ENST00000566215 POTEB3A0JP26 581 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 RAG1P15918 1043 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 ITGB8P26012 769 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 CCDC158Q5M9N0 1113 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 POTEBQ6S5H4 581 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 ERC1Q8IUD2 1116 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 SMC4Q9NTJ3 1288 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 ZEB2O60315 1214 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 CYP2E1P05181 493 aaPredicted RBP7.47□□□□□ -1.21
UBE3A-205ENST00000566215 ERCC3P19447 782 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 TFCP2Q12800 502 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 TNNI3KQ59H18 835 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 C16orf86Q6ZW13 317 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 SP7Q8TDD2 431 aaPredicted RBP7.47□□□□□ -1.21
UBE3A-205ENST00000566215 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBE3A-205ENST00000566215 TRIM34Q9BYJ4 488 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 TMEM39AQ9NV64 488 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 GNEQ9Y223 722 aaKnown RBP7.47□□□□□ -1.21
UBE3A-205ENST00000566215 MTCH2Q9Y6C9 303 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 FPGT-TNNI3KV9GXZ4 949 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 TCRBV5S4A2TA0A5A2 114 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 DPP9Q86TI2 863 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 CRACR2BQ8N4Y2 399 aaPredicted RBP7.47□□□□□ -1.21
UBE3A-205ENST00000566215 VWCEQ96DN2 955 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 AGBL1Q96MI9 1066 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 MMP19Q99542 508 aa7.47□□□□□ -1.21
UBE3A-205ENST00000566215 CAND2O75155 1236 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 GH2P01242 217 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 CXCL10P02778 98 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 SUPT20HL2P0C7V6 817 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 PICALMQ13492 652 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 GJC2Q5T442 439 aaPredicted RBP7.46□□□□□ -1.22
UBE3A-205ENST00000566215 IQSEC1Q6DN90 963 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 SIAH1Q8IUQ4 282 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
UBE3A-205ENST00000566215 NOC4LQ9BVI4 516 aaKnown RBP7.46□□□□□ -1.22
UBE3A-205ENST00000566215 LMAN2LQ9H0V9 348 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 GOPCQ9HD26 462 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 PLXNA3P51805 1871 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 FSD2A1L4K1 749 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 DDX10Q13206 875 aaKnown RBP7.46□□□□□ -1.22
UBE3A-205ENST00000566215 FGD4Q96M96 766 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 VTA1Q9NP79 307 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 POLR3EQ9NVU0 708 aa7.46□□□□□ -1.22
UBE3A-205ENST00000566215 PROB1E7EW31 1015 aa7.45□□□□□ -1.22
UBE3A-205ENST00000566215 VWA5AO00534 786 aa7.45□□□□□ -1.22
UBE3A-205ENST00000566215 SNAI1O95863 264 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms