RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 KCNA10Q16322 511 aa20.49■□□□□ 0.87
CLK3-217ENST00000566126 TINF2Q9BSI4 451 aa20.49■□□□□ 0.87
CLK3-217ENST00000566126 MTIF3Q9H2K0 278 aaKnown RBP20.49■□□□□ 0.87
CLK3-217ENST00000566126 PPP4CP60510 307 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 MVPQ14764 893 aaKnown RBP20.48■□□□□ 0.87
CLK3-217ENST00000566126 OTOP2Q7RTS6 562 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 ADGRA1Q86SQ6 560 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 NCAPG2Q86XI2 1143 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 CDCA7LQ96GN5 454 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 NOL10Q9BSC4 688 aaKnown RBP20.48■□□□□ 0.87
CLK3-217ENST00000566126 HOXC10Q9NYD6 342 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 PCDHA11Q9Y5I1 949 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 USP34Q70CQ2 3546 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 ELP1O95163 1332 aa20.48■□□□□ 0.87
CLK3-217ENST00000566126 MYADML2A6NDP7 307 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 EPOPA6NHQ4 379 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 GTPBP6O43824 516 aaPredicted RBP20.47■□□□□ 0.87
CLK3-217ENST00000566126 BAG3O95817 575 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 HLA-DOAP06340 250 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 PLCG2P16885 1265 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 IRX5P78411 483 aaPredicted RBP20.47■□□□□ 0.87
CLK3-217ENST00000566126 FAM126BQ8IXS8 530 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 HLA-CQ95604 372 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 FBXL18Q96ME1 805 aa20.47■□□□□ 0.87
CLK3-217ENST00000566126 SALL2Q9Y467 1007 aaPredicted RBP20.47■□□□□ 0.87
CLK3-217ENST00000566126 FCER1AP12319 257 aa20.46■□□□□ 0.87
CLK3-217ENST00000566126 MRPL50Q8N5N7 158 aaKnown RBP20.46■□□□□ 0.87
CLK3-217ENST00000566126 GLT1D1Q96MS3 346 aa20.46■□□□□ 0.87
CLK3-217ENST00000566126 COPRSQ9NQ92 184 aa20.46■□□□□ 0.87
CLK3-217ENST00000566126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.46■□□□□ 0.87
CLK3-217ENST00000566126 PARP14Q460N5 1801 aa20.46■□□□□ 0.87
CLK3-217ENST00000566126 MYO5AQ9Y4I1 1855 aaKnown RBP20.45■□□□□ 0.86
CLK3-217ENST00000566126 ARVCFO00192 962 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 PGK2P07205 417 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 PLS1Q14651 629 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 CCDC184Q52MB2 194 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 ATF7IPQ6VMQ6 1270 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 LRP2BPQ9P2M1 347 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 UMODL1Q5DID0 1318 aa20.45■□□□□ 0.86
CLK3-217ENST00000566126 COL11A1P12107 1806 aaPredicted RBP20.44■□□□□ 0.86
CLK3-217ENST00000566126 CD4P01730 458 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 ARID4AP29374 1257 aaPredicted RBP20.44■□□□□ 0.86
CLK3-217ENST00000566126 MCAMP43121 646 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 ZNF792Q3KQV3 632 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
CLK3-217ENST00000566126 MB21D1Q8N884 522 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 UIMC1Q96RL1 719 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 CERS4Q9HA82 394 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 SLC4A7Q9Y6M7 1214 aa20.44■□□□□ 0.86
CLK3-217ENST00000566126 DSG3P32926 999 aa20.43■□□□□ 0.86
CLK3-217ENST00000566126 TFCP2Q12800 502 aa20.43■□□□□ 0.86
CLK3-217ENST00000566126 ABCB5Q2M3G0 1257 aa20.43■□□□□ 0.86
CLK3-217ENST00000566126 TANGO6Q9C0B7 1094 aa20.43■□□□□ 0.86
CLK3-217ENST00000566126 PTPRCP08575 1304 aa20.43■□□□□ 0.86
CLK3-217ENST00000566126 ZNF318Q5VUA4 2279 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 CFAP54Q96N23 3096 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 A0A0U1RQG5 324 aaPredicted RBP20.42■□□□□ 0.86
CLK3-217ENST00000566126 A0A1W2PRG0 241 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 ASGR1P07306 291 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 CST5P28325 142 aaPredicted RBP20.42■□□□□ 0.86
CLK3-217ENST00000566126 CERKLQ49MI3 558 aaPredicted RBP20.42■□□□□ 0.86
CLK3-217ENST00000566126 VWCEQ96DN2 955 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 ATG4CQ96DT6 458 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 AKAP2Q9Y2D5 859 aa20.42■□□□□ 0.86
CLK3-217ENST00000566126 DIS3Q9Y2L1 958 aaKnown RBP20.42■□□□□ 0.86
CLK3-217ENST00000566126 TLR3O15455 904 aaKnown RBP20.41■□□□□ 0.86
CLK3-217ENST00000566126 CA3P07451 260 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 KIAA1755Q5JYT7 1200 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 NEUROD6Q96NK8 337 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 MMP19Q99542 508 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 KCNH6Q9H252 994 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 SERPINB13Q9UIV8 391 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
CLK3-217ENST00000566126 SEPT2Q15019 361 aa20.4■□□□□ 0.86
CLK3-217ENST00000566126 VTI1AQ96AJ9 217 aa20.4■□□□□ 0.86
CLK3-217ENST00000566126 EHD4Q9H223 541 aa20.4■□□□□ 0.86
CLK3-217ENST00000566126 HIPK3Q9H422 1215 aa20.4■□□□□ 0.86
CLK3-217ENST00000566126 CABP5Q9NP86 173 aa20.4■□□□□ 0.86
CLK3-217ENST00000566126 FAM184BQ9ULE4 1060 aa20.4■□□□□ 0.86
CLK3-217ENST00000566126 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
CLK3-217ENST00000566126 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
CLK3-217ENST00000566126 ATP2A2P16615 1042 aaKnown RBP20.39■□□□□ 0.85
CLK3-217ENST00000566126 SHMT1P34896 483 aa20.39■□□□□ 0.85
CLK3-217ENST00000566126 CCL23P55773 120 aa20.39■□□□□ 0.85
CLK3-217ENST00000566126 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.85
CLK3-217ENST00000566126 TMEM132BQ14DG7 1078 aa20.39■□□□□ 0.85
CLK3-217ENST00000566126 GJD3Q8N144 294 aa20.39■□□□□ 0.85
CLK3-217ENST00000566126 PCSK9Q8NBP7 692 aaKnown RBP20.39■□□□□ 0.85
CLK3-217ENST00000566126 COL4A4P53420 1690 aaPredicted RBP20.38■□□□□ 0.85
CLK3-217ENST00000566126 ADCY6O43306 1168 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 ARHGEF15O94989 841 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 SLC25A27O95847 323 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 SNAI1O95863 264 aaPredicted RBP20.38■□□□□ 0.85
CLK3-217ENST00000566126 C6orf222P0C671 652 aaPredicted RBP20.38■□□□□ 0.85
CLK3-217ENST00000566126 TMEM67Q5HYA8 995 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 FAM178BQ8IXR5 827 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 PHOX2BQ99453 314 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 WNT8AQ9H1J5 351 aa20.38■□□□□ 0.85
CLK3-217ENST00000566126 ZBBXA8MT70 800 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms