RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 COL6A3P12111 3177 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 USP17L21D6R901 530 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 SLC25A27O95847 323 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 CHGBP05060 677 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 FCER1AP12319 257 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 EEF2P13639 858 aaKnown RBP13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 ATP5JP18859 108 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 LRRC41Q15345 812 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 DDRGK1Q96HY6 314 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 FAM161BQ96MY7 647 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 MMP19Q99542 508 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 HAUS7Q99871 368 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 SLC4A4Q9Y6R1 1079 aa13.95□□□□□ -0.18
NSMCE1-209ENST00000565384 ADCYAP1R1P41586 468 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 ZNF697Q5TEC3 545 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 KANSL2Q9H9L4 492 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 FBXO28Q9NVF7 368 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 ADAMTS5Q9UNA0 930 aa13.94□□□□□ -0.18
NSMCE1-209ENST00000565384 COL11A1P12107 1806 aaPredicted RBP13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 PGK2P07205 417 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 RARBP10826 455 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 KCTD2Q14681 263 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 SHHQ15465 462 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 C9orf50Q5SZB4 431 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 RIOX2Q8IUF8 465 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 BADQ92934 168 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 XPNPEP3Q9NQH7 507 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 NRBP1Q9UHY1 535 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 PPP1R9AQ9ULJ8 1098 aa13.93□□□□□ -0.18
NSMCE1-209ENST00000565384 VWA5AO00534 786 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 RAD21O60216 631 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 STAT3P40763 770 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 FAM83BQ5T0W9 1011 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 CTR9Q6PD62 1173 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 REPS2Q8NFH8 660 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 ARPP21Q9UBL0 812 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 ZNF214Q9UL59 606 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 PHF24Q9UPV7 400 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 DIS3Q9Y2L1 958 aaKnown RBP13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 ROBO3Q96MS0 1386 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 MYH7P12883 1935 aa13.92□□□□□ -0.18
NSMCE1-209ENST00000565384 TRIM43BA6NCK2 446 aa13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 PGK1P00558 417 aa13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 TAL1P17542 331 aaPredicted RBP13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 COPB2P35606 906 aa13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 ZNF792Q3KQV3 632 aa13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 ZSCAN25Q6NSZ9 544 aa13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 RNF180Q86T96 592 aa13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 TRIM43Q96BQ3 446 aaPredicted RBP13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
NSMCE1-209ENST00000565384 ZNF865P0CJ78 1059 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 AKR1A1P14550 325 aa13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 TLE2Q04725 743 aa13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 LENG1Q96BZ8 264 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 GREB1LQ9C091 1923 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 ZNFX1Q9P2E3 1918 aaKnown RBP13.9□□□□□ -0.18
NSMCE1-209ENST00000565384 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 A0A1W2PQ45 241 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 A0A1W2PQY0 241 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 CLTBP09497 229 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 ITGB8P26012 769 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 NUP88Q99567 741 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 COL25A1Q9BXS0 654 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 TACC3Q9Y6A5 838 aa13.89□□□□□ -0.19
NSMCE1-209ENST00000565384 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 ADAMTS4O75173 837 aa13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 RASA1P20936 1047 aa13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 SMAD3P84022 425 aaKnown RBP13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 SNRNP48Q6IEG0 339 aaKnown RBP13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 TEX13BQ9BXU2 312 aa13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 SEMA6BQ9H3T3 888 aa13.88□□□□□ -0.19
NSMCE1-209ENST00000565384 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 F5H6K3 240 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 KIAA0355O15063 1070 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 NDUFB10O96000 172 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 RAG1P15918 1043 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 KLRC3Q07444 240 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms