RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 IFNAR1P17181 557 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 PRKG1Q13976 671 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 BRAPQ7Z569 592 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 ANKRD13AQ8IZ07 590 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 ENAHQ8N8S7 591 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 ANKS1AQ92625 1134 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 USP28Q96RU2 1077 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 GBA2Q9HCG7 927 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 MTMR4Q9NYA4 1195 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 SYNPO2Q9UMS6 1093 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 MYH4Q9Y623 1939 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 NMT2O60551 498 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 ICA1Q05084 483 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 RRP1BQ14684 758 aaKnown RBP14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 PPP2R5BQ15173 497 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 IFIT1BQ5T764 474 aaKnown RBP14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 PHKBQ93100 1093 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 CEP95Q96GE4 821 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 ALG1Q9BT22 464 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 ARHGEF10LQ9HCE6 1279 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 IL17RBQ9NRM6 502 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 NYAP2Q9P242 653 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 STX8Q9UNK0 236 aa14.63□□□□□ -0.07
NSMCE1-208ENST00000565070 CCDC196A0A1B0GTZ2 297 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 FMNL1O95466 1100 aaPredicted RBP14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 LIG1P18858 919 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 INPP5BP32019 993 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 NOVP48745 357 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 KIF23Q02241 960 aaPredicted RBP14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 SEPT2Q15019 361 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 RTN1Q16799 776 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 ZNF654Q8IZM8 581 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 SH2D4AQ9H788 454 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 RTEL1Q9NZ71 1219 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 PASKQ96RG2 1323 aa14.62□□□□□ -0.07
NSMCE1-208ENST00000565070 USP17L5A8MUK1 530 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 TPRNQ4KMQ1 711 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 FANCBQ8NB91 859 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 PPP1R9BQ96SB3 815 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 FUCA2Q9BTY2 467 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 KAT14Q9H8E8 782 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 GJB4Q9NTQ9 266 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 GUCY1A2P33402 732 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 CCDC173Q0VFZ6 552 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 VGLL4Q14135 290 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 LDLRAD1Q5T700 205 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 WASF1Q92558 559 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 AIFM3Q96NN9 605 aa14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 DDX19AQ9NUU7 478 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-208ENST00000565070 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 KRT40Q6A162 431 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 ANP32BQ92688 251 aaKnown RBP14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 MKL1Q969V6 931 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 POLR3EQ9NVU0 708 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 FZD1Q9UP38 647 aa14.6□□□□□ -0.07
NSMCE1-208ENST00000565070 CALM1P0DP23 149 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 CALM2P0DP24 149 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 CALM3P0DP25 149 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 EEF2P13639 858 aaKnown RBP14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 PTPRAP18433 802 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 JAG1P78504 1218 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 ATP2B2Q01814 1243 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 CEBPZQ03701 1054 aaKnown RBP14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 FMR1Q06787 632 aaKnown RBP eCLIP14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 WDR18Q9BV38 432 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 SLC26A6Q9BXS9 759 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 NUP62CLQ9H1M0 184 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 SNCAIPQ9Y6H5 919 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 DDAH1O94760 285 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 YEATS4O95619 227 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 U2AF2P26368 475 aaKnown RBP eCLIP14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 SHROOM1Q2M3G4 852 aaPredicted RBP14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 CST9Q5W186 159 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 RBM43Q6ZSC3 357 aaKnown RBP14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 TRIM22Q8IYM9 498 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 PNMA1Q8ND90 353 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 BICD2Q8TD16 824 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 TMEM47Q9BQJ4 181 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 CLSTN2Q9H4D0 955 aa14.59□□□□□ -0.07
NSMCE1-208ENST00000565070 PHIPQ8WWQ0 1821 aa14.58□□□□□ -0.07
NSMCE1-208ENST00000565070 UBE2Q2LH0YL09 131 aa14.58□□□□□ -0.08
NSMCE1-208ENST00000565070 DEXIO95424 95 aa14.58□□□□□ -0.08
NSMCE1-208ENST00000565070 PPATQ06203 517 aa14.58□□□□□ -0.08
NSMCE1-208ENST00000565070 TROAPQ12815 778 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms