RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 PGBD1Q96JS3 809 aa17.89■□□□□ 0.45
COMMD4-210ENST00000564587 RIOX1Q9H6W3 641 aa17.89■□□□□ 0.45
COMMD4-210ENST00000564587 MYH4Q9Y623 1939 aa17.89■□□□□ 0.45
COMMD4-210ENST00000564587 CNTNAP1P78357 1384 aa17.89■□□□□ 0.45
COMMD4-210ENST00000564587 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
COMMD4-210ENST00000564587 USP17L5A8MUK1 530 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 H7C1D1 291 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 TRAPPC10P48553 1259 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 GMPSP49915 693 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-210ENST00000564587 MRE11P49959 708 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 ICA1Q05084 483 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 USP17L2Q6R6M4 530 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 LRSAM1Q6UWE0 723 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 DAGLBQ8NCG7 672 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.88■□□□□ 0.45
COMMD4-210ENST00000564587 GINM1Q9NU53 330 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 CNOT7Q9UIV1 285 aaKnown RBP17.88■□□□□ 0.45
COMMD4-210ENST00000564587 CLIC4Q9Y696 253 aa17.88■□□□□ 0.45
COMMD4-210ENST00000564587 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
COMMD4-210ENST00000564587 MAP3K10Q02779 954 aa17.87■□□□□ 0.45
COMMD4-210ENST00000564587 MICALL2Q8IY33 904 aa17.87■□□□□ 0.45
COMMD4-210ENST00000564587 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
COMMD4-210ENST00000564587 HOOK2Q96ED9 719 aa17.87■□□□□ 0.45
COMMD4-210ENST00000564587 BARHL2Q9NY43 387 aa17.87■□□□□ 0.45
COMMD4-210ENST00000564587 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
COMMD4-210ENST00000564587 hCG_1642624A0A1W2PR95 340 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 CTAGE5O15320 804 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 CYTH3O43739 400 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 GNA11P29992 359 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 ATP2B2Q01814 1243 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
COMMD4-210ENST00000564587 GPC2Q8N158 579 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 ARHGEF10LQ9HCE6 1279 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 PCDHA7Q9UN72 937 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 PCDHA4Q9UN74 947 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
COMMD4-210ENST00000564587 ESYT2A0FGR8 921 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 GOLGA8HP0CJ92 632 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 SEPT2Q15019 361 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 PPP1R18Q6NYC8 613 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 BLIDQ8IZY5 108 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
COMMD4-210ENST00000564587 FTOQ9C0B1 505 aaKnown RBP eCLIP17.85■□□□□ 0.45
COMMD4-210ENST00000564587 NUP62CLQ9H1M0 184 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 SH2D4AQ9H788 454 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
COMMD4-210ENST00000564587 BAZ2BQ9UIF8 2168 aaKnown RBP17.84■□□□□ 0.45
COMMD4-210ENST00000564587 SYCE3A1L190 88 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 TRIM75PA6NK02 468 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 FAM196BA6NMK8 535 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 STXBP3O00186 592 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 CUTAO60888 179 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 GH2P01242 217 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 PRELPP51888 382 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 FAM160A1Q05DH4 1040 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 NR5A1Q13285 461 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 PTPAQ15257 358 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 CCDC96Q2M329 555 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 KIF4BQ2VIQ3 1234 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 SLFN13Q68D06 897 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 TNFRSF25Q93038 417 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 GMCL1Q96IK5 515 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
COMMD4-210ENST00000564587 PNMA6FA0A0J9YX94 578 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 GDF11O95390 407 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 LIG1P18858 919 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 CMA1P23946 247 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 SLC1A4P43007 532 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 RASA3Q14644 834 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 NPY5RQ15761 445 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 SLC35G1Q2M3R5 365 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 WWC2Q6AWC2 1192 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 APOBEC3FQ8IUX4 373 aaKnown RBP17.83■□□□□ 0.44
COMMD4-210ENST00000564587 FSIP1Q8NA03 581 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 OXER1Q8TDS5 423 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 TMEM39BQ9GZU3 492 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 ZMYND12Q9H0C1 365 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 GLT8D2Q9H1C3 349 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 CLSTN2Q9H4D0 955 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 DACT1Q9NYF0 836 aa17.83■□□□□ 0.44
COMMD4-210ENST00000564587 ZNF541Q9H0D2 1346 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 KINO60870 393 aaKnown RBP17.82■□□□□ 0.44
COMMD4-210ENST00000564587 ASNSP08243 561 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-210ENST00000564587 NAPAP54920 295 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 TRAF1Q13077 416 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 MAP3K11Q16584 847 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 KRI1Q8N9T8 703 aaKnown RBP17.82■□□□□ 0.44
COMMD4-210ENST00000564587 PIBF1Q8WXW3 757 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 SHISA4Q96DD7 197 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 PIGSQ96S52 555 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 TNMDQ9H2S6 317 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 TSPY26PQ9H489 355 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms