RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 LRRC41Q15345 812 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 TRIM60Q495X7 471 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 GOPCQ9HD26 462 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 NRBP1Q9UHY1 535 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 SLC4A4Q9Y6R1 1079 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 COL6A3P12111 3177 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 ZBED9Q6R2W3 1325 aa19.94■□□□□ 0.78
CMTM3-205ENST00000562707 RAD21O60216 631 aa19.93■□□□□ 0.78
CMTM3-205ENST00000562707 ZNF697Q5TEC3 545 aa19.93■□□□□ 0.78
CMTM3-205ENST00000562707 RIOX2Q8IUF8 465 aa19.93■□□□□ 0.78
CMTM3-205ENST00000562707 FERMT2Q96AC1 680 aa19.93■□□□□ 0.78
CMTM3-205ENST00000562707 ADAMTS5Q9UNA0 930 aa19.93■□□□□ 0.78
CMTM3-205ENST00000562707 RARBP10826 455 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 COPB2P35606 906 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 STAT3P40763 770 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 SNX17Q15036 470 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 SHHQ15465 462 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 BADQ92934 168 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 FAM161BQ96MY7 647 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 XPNPEP3Q9NQH7 507 aa19.92■□□□□ 0.78
CMTM3-205ENST00000562707 DIS3Q9Y2L1 958 aaKnown RBP19.92■□□□□ 0.78
CMTM3-205ENST00000562707 SMIM22K7EJ46 135 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 PGK2P07205 417 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 C1orf53Q5VUE5 145 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 CTR9Q6PD62 1173 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 RNF180Q86T96 592 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 GUCD1Q96NT3 240 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 TINF2Q9BSI4 451 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 FBXO28Q9NVF7 368 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 PPP1R9AQ9ULJ8 1098 aa19.91■□□□□ 0.78
CMTM3-205ENST00000562707 NAV1Q8NEY1 1877 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 VWA5AO00534 786 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 ZNF792Q3KQV3 632 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 FAM83BQ5T0W9 1011 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 PDLIM7Q9NR12 457 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 PHF24Q9UPV7 400 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 TACC3Q9Y6A5 838 aa19.9■□□□□ 0.78
CMTM3-205ENST00000562707 TLE2Q04725 743 aa19.89■□□□□ 0.77
CMTM3-205ENST00000562707 C9orf50Q5SZB4 431 aa19.89■□□□□ 0.77
CMTM3-205ENST00000562707 LRRCC1Q9C099 1032 aa19.89■□□□□ 0.77
CMTM3-205ENST00000562707 PUS7LQ9H0K6 701 aaKnown RBP19.89■□□□□ 0.77
CMTM3-205ENST00000562707 ARPP21Q9UBL0 812 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-205ENST00000562707 ZNF236Q9UL36 1845 aa19.89■□□□□ 0.77
CMTM3-205ENST00000562707 CNPY2Q9Y2B0 182 aa19.89■□□□□ 0.77
CMTM3-205ENST00000562707 TRIM43BA6NCK2 446 aa19.88■□□□□ 0.77
CMTM3-205ENST00000562707 CHGBP05060 677 aa19.88■□□□□ 0.77
CMTM3-205ENST00000562707 SH3RF1Q7Z6J0 888 aa19.88■□□□□ 0.77
CMTM3-205ENST00000562707 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.88■□□□□ 0.77
CMTM3-205ENST00000562707 TRIM43Q96BQ3 446 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-205ENST00000562707 MKNK2Q9HBH9 465 aa19.88■□□□□ 0.77
CMTM3-205ENST00000562707 ZNF214Q9UL59 606 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-205ENST00000562707 PGK1P00558 417 aa19.87■□□□□ 0.77
CMTM3-205ENST00000562707 AKR1A1P14550 325 aa19.87■□□□□ 0.77
CMTM3-205ENST00000562707 ZNF865P0CJ78 1059 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-205ENST00000562707 TAL1P17542 331 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-205ENST00000562707 SMAD3P84022 425 aaKnown RBP19.86■□□□□ 0.77
CMTM3-205ENST00000562707 SBK1Q52WX2 424 aa19.86■□□□□ 0.77
CMTM3-205ENST00000562707 DDX11Q96FC9 970 aa19.86■□□□□ 0.77
CMTM3-205ENST00000562707 STRBPQ96SI9 672 aaKnown RBP19.86■□□□□ 0.77
CMTM3-205ENST00000562707 SLF1Q9BQI6 1058 aa19.86■□□□□ 0.77
CMTM3-205ENST00000562707 TEX13BQ9BXU2 312 aa19.86■□□□□ 0.77
CMTM3-205ENST00000562707 SEMA6BQ9H3T3 888 aa19.86■□□□□ 0.77
CMTM3-205ENST00000562707 CTDP1Q9Y5B0 961 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-205ENST00000562707 A0A0C4DFX4 3053 aa19.86■□□□□ 0.77
CMTM3-205ENST00000562707 A0A0G2JMZ2 1700 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 CLTBP09497 229 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 STK11IPQ8N1F8 1099 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 MSL3Q8N5Y2 521 aaKnown RBP19.85■□□□□ 0.77
CMTM3-205ENST00000562707 REPS2Q8NFH8 660 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 CDX2Q99626 313 aaPredicted RBP19.85■□□□□ 0.77
CMTM3-205ENST00000562707 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.85■□□□□ 0.77
CMTM3-205ENST00000562707 ECHDC1Q9NTX5 307 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 NYAP2Q9P242 653 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 FRMPD3Q5JV73 1810 aa19.85■□□□□ 0.77
CMTM3-205ENST00000562707 A0A1W2PQ45 241 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 A0A1W2PQY0 241 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 F5H6K3 240 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 SMARCA5O60264 1052 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 ZBED4O75132 1171 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 RAG1P15918 1043 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 RASA1P20936 1047 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 SLC4A3P48751 1232 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 KLRC3Q07444 240 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 DIEXFQ68CQ4 756 aaKnown RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 SNRNP48Q6IEG0 339 aaKnown RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 GIMAP6Q6P9H5 292 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 PRPF38AQ8NAV1 312 aaKnown RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 NUP88Q99567 741 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 TSEN34Q9BSV6 310 aaKnown RBP19.84■□□□□ 0.77
CMTM3-205ENST00000562707 TMEM39AQ9NV64 488 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 FAM184BQ9ULE4 1060 aa19.84■□□□□ 0.77
CMTM3-205ENST00000562707 GSG1L2A8MUP6 293 aa19.83■□□□□ 0.77
CMTM3-205ENST00000562707 KIAA0355O15063 1070 aa19.83■□□□□ 0.77
CMTM3-205ENST00000562707 PQBP1O60828 265 aaKnown RBP19.83■□□□□ 0.77
CMTM3-205ENST00000562707 ZNF444Q8N0Y2 327 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-205ENST00000562707 NUP133Q8WUM0 1156 aa19.83■□□□□ 0.77
CMTM3-205ENST00000562707 COL25A1Q9BXS0 654 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-205ENST00000562707 ZNF287Q9HBT7 754 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms