RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ATN1P54259 1190 aaPredicted RBP20.05■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 MDM2Q00987 491 aaPredicted RBP20.05■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 ANO1Q5XXA6 986 aa20.05■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 TSHZ3Q63HK5 1081 aa20.05■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 MAML3Q96JK9 1138 aa20.05■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 STRBPQ96SI9 672 aaKnown RBP20.05■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 GSG1L2A8MUP6 293 aa20.04■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 SEPT4O43236 478 aa20.04■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 PRAMEF19Q5SWL8 479 aa20.04■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 GJC2Q5T442 439 aaPredicted RBP20.04■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 GPR153Q6NV75 609 aa20.04■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 FCER1AP12319 257 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 RASA1P20936 1047 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 SBK1Q52WX2 424 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 OSBP2Q969R2 916 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 DCTPP1Q9H773 170 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 GOPCQ9HD26 462 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 SLC5A4Q9NY91 659 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 PPP1R9AQ9ULJ8 1098 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 ROBO3Q96MS0 1386 aa20.03■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 LTBP2Q14767 1821 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 VWA5AO00534 786 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 SLC25A27O95847 323 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 FAM83BQ5T0W9 1011 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 Q7L0L9 218 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 RIOX2Q8IUF8 465 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 REPS2Q8NFH8 660 aa20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 ZNF214Q9UL59 606 aaPredicted RBP20.02■□□□□ 0.8
VPS9D1-AS1-201ENST00000562298 ZNFX1Q9P2E3 1918 aaKnown RBP20.02■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 EYSQ5T1H1 3165 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 RAD21O60216 631 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 PGK2P07205 417 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 RTP1P59025 263 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 GIMAP6Q6P9H5 292 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 DEFB123Q8N688 67 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 ARRDC4Q8NCT1 418 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 APPBP2Q92624 585 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 MMP19Q99542 508 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 EPB41L4AQ9HCS5 686 aaPredicted RBP20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 UNC80Q8N2C7 3258 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 PLXNA1Q9UIW2 1896 aa20.01■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 FAM47AQ5JRC9 791 aa20■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 NUP88Q99567 741 aaPredicted RBP20■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 MINDY4BA8MYZ0 360 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 KBTBD13C9JR72 458 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 M0R2C6 588 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 GPAA1O43292 621 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 STAT3P40763 770 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 GPATCH3Q96I76 525 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 ATP11BQ9Y2G3 1177 aa19.99■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 IGKV6D-41A0A0C4DH26 115 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 MYCNP04198 464 aaPredicted RBP19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 KCTD2Q14681 263 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 SNX17Q15036 470 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 LRRC41Q15345 812 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 ZNF792Q3KQV3 632 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 SLC39A5Q6ZMH5 540 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 NYAP2Q9P242 653 aa19.98■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 F5H6K3 240 aa19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 NDUFB10O96000 172 aa19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 ZFYP08048 801 aaPredicted RBP19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 TAL1P17542 331 aaPredicted RBP19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 KLRC3Q07444 240 aa19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 LBHD1Q9BQE6 289 aaPredicted RBP19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 SLF1Q9BQI6 1058 aa19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 TINF2Q9BSI4 451 aa19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 DIS3Q9Y2L1 958 aaKnown RBP19.97■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 MYH4Q9Y623 1939 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 ADCYAP1R1P41586 468 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 TDO2P48775 406 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 TRIM60Q495X7 471 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 SLC17A8Q8NDX2 589 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 FERMT2Q96AC1 680 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 NRBP1Q9UHY1 535 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 RIPK3Q9Y572 518 aa19.96■□□□□ 0.79
VPS9D1-AS1-201ENST00000562298 PRDM1O75626 825 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 GNAT2P19087 354 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 COPB2P35606 906 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PI4K2BQ8TCG2 481 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SEC62Q99442 399 aaKnown RBP19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 TEX13BQ9BXU2 312 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 XPNPEP3Q9NQH7 507 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 MTMR10Q9NXD2 777 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 CLIP2Q9UDT6 1046 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PRKAG2Q9UGJ0 569 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PCDHB15Q9Y5E8 787 aa19.95■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 ZNF865P0CJ78 1059 aaPredicted RBP19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 RARBP10826 455 aa19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SNRNP48Q6IEG0 339 aaKnown RBP19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PRPF38AQ8NAV1 312 aaKnown RBP19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 OTUD7AQ8TE49 926 aaPredicted RBP19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 LENG1Q96BZ8 264 aaPredicted RBP19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 CEP95Q96GE4 821 aa19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 TTC41PQ6P2S7 1318 aa19.94■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SMCHD1A6NHR9 2005 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PATL2C9JE40 543 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms