RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 GDPD2Q9HCC8 539 aa16.5■□□□□ 0.23
CNN2-204ENST00000562075 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
CNN2-204ENST00000562075 VPS54Q9P1Q0 977 aa16.5■□□□□ 0.23
CNN2-204ENST00000562075 KCNJ14Q9UNX9 436 aa16.5■□□□□ 0.23
CNN2-204ENST00000562075 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 CYTH3O43739 400 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 SLC1A4P43007 532 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 SH2D4AQ9H788 454 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 GINM1Q9NU53 330 aa16.49■□□□□ 0.23
CNN2-204ENST00000562075 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
CNN2-204ENST00000562075 F5H6K3 240 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 TRAK2O60296 914 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 EPHX2P34913 555 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 KLRC3Q07444 240 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
CNN2-204ENST00000562075 ATL3Q6DD88 541 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 USP50Q70EL3 339 aaPredicted RBP16.48■□□□□ 0.23
CNN2-204ENST00000562075 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
CNN2-204ENST00000562075 GMCL1Q96IK5 515 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 SCAND2PQ9GZW5 306 aaPredicted RBP16.48■□□□□ 0.23
CNN2-204ENST00000562075 RIOX1Q9H6W3 641 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 GOPCQ9HD26 462 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 SH3GLB2Q9NR46 395 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 TFIP11Q9UBB9 837 aaKnown RBP16.48■□□□□ 0.23
CNN2-204ENST00000562075 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 TCHHQ07283 1943 aa16.48■□□□□ 0.23
CNN2-204ENST00000562075 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
CNN2-204ENST00000562075 NDUFB10O96000 172 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.23
CNN2-204ENST00000562075 SUPT20HL1Q3ZLR7 823 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 TTBK2Q6IQ55 1244 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 ACER1Q8TDN7 264 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.239e-6■■□□□ 14.5
CNN2-204ENST00000562075 PHF20Q9BVI0 1012 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 FOXP1Q9H334 677 aaPredicted RBP16.47■□□□□ 0.23
CNN2-204ENST00000562075 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.47■□□□□ 0.23
CNN2-204ENST00000562075 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
CNN2-204ENST00000562075 DOCK1Q14185 1865 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 KRT2P35908 639 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 ECE1P42892 770 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 NLRP5P59047 1200 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 WWC2Q6AWC2 1192 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 SPATA32Q96LK8 384 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 PIGSQ96S52 555 aa16.46■□□□□ 0.23
CNN2-204ENST00000562075 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
CNN2-204ENST00000562075 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
CNN2-204ENST00000562075 SCN4AP35499 1836 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 BTBD18B2RXH4 712 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 ADM5C9JUS6 153 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 STXBP3O00186 592 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 BMP3P12645 472 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 CALML3P27482 149 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 INPP5BP32019 993 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 SLC16A2P36021 539 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 NOSTRINQ8IVI9 506 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 ADGRF4Q8IZF3 695 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 FAM177A1Q8N128 213 aaPredicted RBP16.45■□□□□ 0.22
CNN2-204ENST00000562075 ZC3H15Q8WU90 426 aaKnown RBP16.45■□□□□ 0.22
CNN2-204ENST00000562075 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
CNN2-204ENST00000562075 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
CNN2-204ENST00000562075 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
CNN2-204ENST00000562075 FEZ1Q99689 392 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 BARHL2Q9NY43 387 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 ZNF112Q9UJU3 913 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 SSC5DA1L4H1 1573 aa16.45■□□□□ 0.22
CNN2-204ENST00000562075 hCG_1984214I3L0E3 225 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 MBD3O95983 291 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 VEGFAP15692 232 aaPredicted RBP16.44■□□□□ 0.22
CNN2-204ENST00000562075 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
CNN2-204ENST00000562075 IKQ13123 557 aaPredicted RBP16.44■□□□□ 0.22
CNN2-204ENST00000562075 KRT26Q7Z3Y9 468 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
CNN2-204ENST00000562075 SCYL3Q8IZE3 742 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 ZNF713Q8N859 430 aaPredicted RBP16.44■□□□□ 0.22
CNN2-204ENST00000562075 OXER1Q8TDS5 423 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 USP28Q96RU2 1077 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 TAF1DQ9H5J8 278 aaPredicted RBP16.44■□□□□ 0.22
CNN2-204ENST00000562075 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 PICK1Q9NRD5 415 aa16.44■□□□□ 0.22
CNN2-204ENST00000562075 WDR90Q96KV7 1748 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms