RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GMIPQ9P107 970 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 TOP2AP11388 1531 aaKnown RBP5.58□□□□□ -1.52
HERC1-215ENST00000561436 ATE1O95260 518 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 PAPLNO95428 1278 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 ESR1P03372 595 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 NLRC3Q7RTR2 1065 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 CREG2Q8IUH2 290 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 SLC9A7Q96T83 725 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 TRIM55Q9BYV6 548 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 EHMT1Q9H9B1 1298 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 SLAMF8Q9P0V8 285 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 KIF21AQ7Z4S6 1674 aa5.58□□□□□ -1.52
HERC1-215ENST00000561436 ZNF608Q9ULD9 1512 aaPredicted RBP5.58□□□□□ -1.52
HERC1-215ENST00000561436 DNAJC25-GNG10A0A024R161 153 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 RGS13O14921 159 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 ACRP10323 421 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 TPP2P29144 1249 aaPredicted RBP5.57□□□□□ -1.52
HERC1-215ENST00000561436 KIR3DL1P43629 444 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 RALGPS1Q5JS13 557 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 TDRD10Q5VZ19 366 aaKnown RBP5.57□□□□□ -1.52
HERC1-215ENST00000561436 TMC3Q7Z5M5 1100 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 TMEM192Q8IY95 271 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 PMFBP1Q8TBY8 1022 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 RNF141Q8WVD5 230 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 TMEM40Q8WWA1 233 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 CNNM2Q9H8M5 875 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 C19orf73Q9NVV2 129 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 PRKAG3Q9UGI9 489 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 ZNRF3Q9ULT6 936 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 TOPBP1Q92547 1522 aa5.57□□□□□ -1.52
HERC1-215ENST00000561436 MEIS1O00470 390 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 NME1P15531 152 aaKnown RBP5.56□□□□□ -1.52
HERC1-215ENST00000561436 ERVFC1P60507 584 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 RBL2Q08999 1139 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 ZYXQ15942 572 aaKnown RBP5.56□□□□□ -1.52
HERC1-215ENST00000561436 FYB2Q5VWT5 728 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 SLC23A3Q6PIS1 610 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 SLC6A18Q96N87 628 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 ZNF408Q9H9D4 720 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 MRVI1Q9Y6F6 885 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 RIMBP3CA6NJZ7 1639 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 RIMBP3BA6NNM3 1639 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 RIMBP3Q9UFD9 1639 aa5.56□□□□□ -1.52
HERC1-215ENST00000561436 ITGB5P18084 799 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 HK2P52789 917 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 CHMP4BP1P59074 171 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 CDCP2Q5VXM1 449 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 ANKS3Q6ZW76 656 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 VWCEQ96DN2 955 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 DUSP13Q9UII6 198 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 PCDHA11Q9Y5I1 949 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 SLC12A7Q9Y666 1083 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 CCDC88BA6NC98 1476 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 ARAP1Q96P48 1450 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 SOGA1O94964 1423 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 CARMIL2Q6F5E8 1435 aa5.55□□□□□ -1.52
HERC1-215ENST00000561436 AQRO60306 1485 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■■■■□ 20
HERC1-215ENST00000561436 C9IYK1 514 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 LTKP29376 864 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 TRHRP34981 398 aaPredicted RBP5.54□□□□□ -1.52
HERC1-215ENST00000561436 GIPRP48546 466 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 EGR3Q06889 387 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 NFE2L2Q16236 605 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 GAB4Q2WGN9 574 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 NBPF12Q5TAG4 269 aaPredicted RBP5.54□□□□□ -1.52
HERC1-215ENST00000561436 DPH6Q7L8W6 267 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 RBBP8NLQ8NC74 664 aaPredicted RBP5.54□□□□□ -1.52
HERC1-215ENST00000561436 PIWIL2Q8TC59 973 aaKnown RBP5.54□□□□□ -1.52
HERC1-215ENST00000561436 SHDQ96IW2 340 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 TM9SF2Q99805 663 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 ASPNQ9BXN1 380 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 OSBPL2Q9H1P3 480 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 ADAMTS10Q9H324 1103 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 ACTR10Q9NZ32 417 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 KCNH3Q9ULD8 1083 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 CTNND2Q9UQB3 1225 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 RNF114Q9Y508 228 aa5.54□□□□□ -1.52
HERC1-215ENST00000561436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.54□□□□□ -1.52
HERC1-215ENST00000561436 MEIS3P2A8K0S8 358 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 SMAD7O15105 426 aaKnown RBP5.53□□□□□ -1.52
HERC1-215ENST00000561436 CLEC3AO75596 197 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 SRFP11831 508 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 GALK1P51570 392 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 NMIQ13287 307 aaPredicted RBP5.53□□□□□ -1.52
HERC1-215ENST00000561436 CLEC16AQ2KHT3 1053 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 ZPBP2Q6X784 338 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 THAP5Q7Z6K1 395 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 TSPYL5Q86VY4 417 aaPredicted RBP5.53□□□□□ -1.52
HERC1-215ENST00000561436 PPFIBP1Q86W92 1011 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 LSRQ86X29 649 aaPredicted RBP5.53□□□□□ -1.52
HERC1-215ENST00000561436 GPR62Q9BZJ7 368 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 LNPKQ9C0E8 428 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 MKRN2Q9H000 416 aaKnown RBP5.53□□□□□ -1.52
HERC1-215ENST00000561436 ZSWIM4Q9H7M6 989 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 GPATCH2Q9NW75 528 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 SIRPGQ9P1W8 387 aa5.53□□□□□ -1.52
HERC1-215ENST00000561436 WDR97A6NE52 1622 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 MAGI1Q96QZ7 1491 aaPredicted RBP5.52□□□□□ -1.53
HERC1-215ENST00000561436 FKTNO75072 461 aa5.52□□□□□ -1.53
HERC1-215ENST00000561436 PRAMEF1O95521 474 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms