RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CFAP100Q494V2 611 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 FOXR1Q6PIV2 292 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 GPATCH11Q8N954 259 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 CCDC88AQ3V6T2 1871 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 LAMB1P07942 1786 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 MYH6P13533 1939 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 ZNF202O95125 648 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 MMP1P03956 469 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 PCP11498 1178 aaKnown RBP15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 RFC4P35249 363 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 ANKRD20A12PQ8NF67 263 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 CCDC12Q8WUD4 166 aaPredicted RBP15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 HSD3B7Q9H2F3 369 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 CDC23Q9UJX2 597 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 DEXIO95424 95 aa15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 MAP2K2P36507 400 aa15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 CT47A1Q5JQC4 288 aaPredicted RBP15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 NOSTRINQ8IVI9 506 aa15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 ENAHQ8N8S7 591 aaPredicted RBP15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 NUP133Q8WUM0 1156 aa15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 ZSCAN10Q96SZ4 725 aaPredicted RBP15.77■□□□□ 0.12
RABGGTA-220ENST00000560998 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 CASP8Q14790 479 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 PPP2R5BQ15173 497 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 SAFBQ15424 915 aaKnown RBP eCLIP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 TMED8Q6PL24 325 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 TXNRD3Q86VQ6 643 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 FAM177A1Q8N128 213 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 AFAP1L1Q8TED9 768 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 KCNJ14Q9UNX9 436 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 HPSEQ9Y251 543 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 KIAA1551Q9HCM1 1747 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 FAM237AA0A1B0GTK4 181 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 BTBD18B2RXH4 712 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 PRDX5P30044 214 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 NFIXQ14938 502 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 FAM196AQ6ZSG2 479 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 DIS3L2Q8IYB7 885 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 CMTR1Q8N1G2 835 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 CCDC82Q8N4S0 544 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 BANK1Q8NDB2 785 aa15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 CRNKL1Q9BZJ0 848 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
RABGGTA-220ENST00000560998 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 USP17L21D6R901 530 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 ERLIN2O94905 339 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 CCDC175P0C221 793 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 SHC4Q6S5L8 630 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 FOXP1Q9H334 677 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 ABCB6Q9NP58 842 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 ORC4O43929 436 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 PRDM1O75626 825 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 ATP1A3P13637 1013 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 MCM3P25205 808 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 GRAPQ13588 217 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 RESP18Q5W5W9 173 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 GRAPLQ8TC17 118 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 RNF26Q9BY78 433 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 FAM204AQ9H8W3 233 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 ATP8A2Q9NTI2 1148 aa15.75■□□□□ 0.11
RABGGTA-220ENST00000560998 SYKP43405 635 aa15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 TOB1P50616 345 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 IFIT1BQ5T764 474 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 WDR93Q6P2C0 686 aa15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 CATIPQ7Z7H3 387 aa15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 IQCA1Q86XH1 822 aa15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 MICALL1Q8N3F8 863 aa15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 DPF2Q92785 391 aa15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 NAA15Q9BXJ9 866 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 A1CFQ9NQ94 594 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-220ENST00000560998 KIF5CO60282 957 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 ONECUT3O60422 494 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 N4BP1O75113 896 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 EVX2Q03828 476 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 FUT2Q10981 343 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 WHAMMP3Q1A5X7 153 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 MEX3CQ5U5Q3 659 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 CLIC6Q96NY7 704 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 PNKPQ96T60 521 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 LEMD3Q9Y2U8 911 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 ATXN2Q99700 1313 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 BIN1O00499 593 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 SHOX2O60902 331 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 SBK1Q52WX2 424 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 SPECC1LQ69YQ0 1117 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 TOGARAM2Q6ZUX3 1019 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 SLC51AQ86UW1 340 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms