RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 COG2Q14746 738 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
HERC1-210ENST00000560897 KCNA10Q16322 511 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 MB21D1Q8N884 522 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 PCSK9Q8NBP7 692 aaKnown RBP11.75□□□□□ -0.53
HERC1-210ENST00000560897 TGFBRAP1Q8WUH2 860 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 SPC25Q9HBM1 224 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 CABP5Q9NP86 173 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 AATFQ9NY61 560 aaKnown RBP eCLIP11.75□□□□□ -0.53
HERC1-210ENST00000560897 FLT1P17948 1338 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 REV3LO60673 3130 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 ZNFX1Q9P2E3 1918 aaKnown RBP11.74□□□□□ -0.53
HERC1-210ENST00000560897 ARVCFO00192 962 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 RFXAPO00287 272 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 ATP2A2P16615 1042 aaKnown RBP11.74□□□□□ -0.53
HERC1-210ENST00000560897 CYP2C18P33260 490 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
HERC1-210ENST00000560897 LENG1Q96BZ8 264 aaPredicted RBP11.74□□□□□ -0.53
HERC1-210ENST00000560897 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 CERS4Q9HA82 394 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 SYNRGQ9UMZ2 1314 aa11.74□□□□□ -0.53
HERC1-210ENST00000560897 CA3P07451 260 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 METTL16Q86W50 562 aaKnown RBP11.73□□□□□ -0.53
HERC1-210ENST00000560897 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 ARNTL2Q8WYA1 636 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 MMP19Q99542 508 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 CD320Q9NPF0 282 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
HERC1-210ENST00000560897 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
HERC1-210ENST00000560897 ZDBF2Q9HCK1 2354 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 SLC25A27O95847 323 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
HERC1-210ENST00000560897 KCTD2Q14681 263 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 ABCB5Q2M3G0 1257 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 KRT40Q6A162 431 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 FAM126BQ8IXS8 530 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 SPATA5Q8NB90 893 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
HERC1-210ENST00000560897 AKAP2Q9Y2D5 859 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 BRWD1Q9NSI6 2320 aa11.72□□□□□ -0.53
HERC1-210ENST00000560897 DCXO43602 365 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 ASGR1P07306 291 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 ZNF865P0CJ78 1059 aaPredicted RBP11.71□□□□□ -0.53
HERC1-210ENST00000560897 TAL1P17542 331 aaPredicted RBP11.71□□□□□ -0.53
HERC1-210ENST00000560897 CDK7P50613 346 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
HERC1-210ENST00000560897 NAA16Q6N069 864 aaPredicted RBP11.71□□□□□ -0.53
HERC1-210ENST00000560897 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
HERC1-210ENST00000560897 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 ACER1Q8TDN7 264 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 XAGE2Q96GT9 111 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.53
HERC1-210ENST00000560897 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
HERC1-210ENST00000560897 FOCADQ5VW36 1801 aa11.71□□□□□ -0.54
HERC1-210ENST00000560897 ZNF536O15090 1300 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 A0A1B0GUL7 405 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 KIF28PB7ZC32 967 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 DUSP11O75319 330 aaKnown RBP11.7□□□□□ -0.54
HERC1-210ENST00000560897 FLOT1O75955 427 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 PGK2P07205 417 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 CST5P28325 142 aaPredicted RBP11.7□□□□□ -0.54
HERC1-210ENST00000560897 CCL23P55773 120 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 TIMM10P62072 90 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 FAM178BQ8IXR5 827 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 NEUROD6Q96NK8 337 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 MYH1P12882 1939 aa11.7□□□□□ -0.54
HERC1-210ENST00000560897 MYADML2A6NDP7 307 aa11.69□□□□□ -0.54
HERC1-210ENST00000560897 PFKMP08237 780 aa11.69□□□□□ -0.54
HERC1-210ENST00000560897 ACTN1P12814 892 aa11.69□□□□□ -0.54
HERC1-210ENST00000560897 GNASQ5JWF2 1037 aa11.69□□□□□ -0.54
HERC1-210ENST00000560897 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
HERC1-210ENST00000560897 UBE2ZQ9H832 354 aaPredicted RBP11.69□□□□□ -0.54
HERC1-210ENST00000560897 EPOPA6NHQ4 379 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 DSG3P32926 999 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 COPB2P35606 906 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 PTPN5P54829 565 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 GRB10Q13322 594 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 ZNF792Q3KQV3 632 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 CCSAPQ6IQ19 270 aaPredicted RBP11.68□□□□□ -0.54
HERC1-210ENST00000560897 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
HERC1-210ENST00000560897 SLC9A7Q96T83 725 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
HERC1-210ENST00000560897 ZNF318Q5VUA4 2279 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 TRANK1O15050 2925 aa11.68□□□□□ -0.54
HERC1-210ENST00000560897 WDFY4Q6ZS81 3184 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms