RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 PCDHB12Q9Y5F1 795 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 ESYT3A0FGR9 886 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 FAM170BA6NMN3 283 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 FAM153BP0C7A2 387 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 ZNF445P59923 1031 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 CYP27C1Q4G0S4 372 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 ZNF662Q6ZS27 426 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 MFSD14AQ96MC6 490 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 PRDM14Q9GZV8 571 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 GBP3Q9H0R5 595 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 FANCLQ9NW38 375 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 PTCH2Q9Y6C5 1203 aa8.23□□□□□ -1.09
MARK3-220ENST00000560417 PRR33A8MZF0 331 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 PPM1BO75688 479 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 GDF11O95390 407 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 ITGA4P13612 1032 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 CYP27A1Q02318 531 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 NFIAQ12857 509 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 ARHGEF39Q8N4T4 335 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 BVESQ8NE79 360 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 APPBP2Q92624 585 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 MRGPRX3Q96LB0 322 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 ARHGEF4Q9NR80 690 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 FHOD1Q9Y613 1164 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 SBNO2Q9Y2G9 1366 aa8.22□□□□□ -1.09
MARK3-220ENST00000560417 AGRPO00253 132 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 ITGAVP06756 1048 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 H2AFB1P0C5Y9 115 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 H2AFB2P0C5Z0 115 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 TNK2Q07912 1038 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 ZC3H12BQ5HYM0 836 aaKnown RBP8.21□□□□□ -1.1
MARK3-220ENST00000560417 ADAT2Q7Z6V5 191 aaKnown RBP8.21□□□□□ -1.1
MARK3-220ENST00000560417 ZNF227Q86WZ6 799 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 HOMER1Q86YM7 354 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 SYTL5Q8TDW5 730 aaPredicted RBP8.21□□□□□ -1.1
MARK3-220ENST00000560417 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 KCNH3Q9ULD8 1083 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 EMC9Q9Y3B6 208 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 CAPN6Q9Y6Q1 641 aa8.21□□□□□ -1.1
MARK3-220ENST00000560417 CDC45O75419 566 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 CBX7O95931 251 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 SRFP11831 508 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 PPP2R2AP63151 447 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 TMEM67Q5HYA8 995 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 FOXB2Q5VYV0 432 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 TMC3Q7Z5M5 1100 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 KIAA0907Q7Z7F0 614 aaPredicted RBP8.2□□□□□ -1.1
MARK3-220ENST00000560417 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 PIWIL2Q8TC59 973 aaKnown RBP8.2□□□□□ -1.1
MARK3-220ENST00000560417 LGR4Q9BXB1 951 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 MKNK2Q9HBH9 465 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 FBXL21Q9UKT6 434 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 U3KQE9 123 aa8.2□□□□□ -1.1
MARK3-220ENST00000560417 SIGLEC6O43699 453 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 OXCT1P55809 520 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 NKAPLQ5M9Q1 402 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 MFSD4AQ8N468 514 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 TMEM151AQ8N4L1 468 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 BRF1Q92994 677 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 KISS1RQ969F8 398 aaPredicted RBP8.19□□□□□ -1.1
MARK3-220ENST00000560417 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 METTL22Q9BUU2 404 aaPredicted RBP8.19□□□□□ -1.1
MARK3-220ENST00000560417 GPR62Q9BZJ7 368 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 GFOD1Q9NXC2 390 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 CGGBP1Q9UFW8 167 aaPredicted RBP8.19□□□□□ -1.1
MARK3-220ENST00000560417 DIS3Q9Y2L1 958 aaKnown RBP8.19□□□□□ -1.1
MARK3-220ENST00000560417 SUGT1Q9Y2Z0 365 aa8.19□□□□□ -1.1
MARK3-220ENST00000560417 SHISA3A0PJX4 238 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 GSC2O15499 205 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 TBX1O43435 398 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 PROCP04070 461 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 HSP90AA2PQ14568 343 aaPredicted RBP8.18□□□□□ -1.1
MARK3-220ENST00000560417 CPSF6Q16630 551 aaKnown RBP eCLIP8.18□□□□□ -1.1
MARK3-220ENST00000560417 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 ADCY4Q8NFM4 1077 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
MARK3-220ENST00000560417 EXOC2Q96KP1 924 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 AARSD1Q9BTE6 412 aaKnown RBP8.18□□□□□ -1.1
MARK3-220ENST00000560417 HDAC8Q9BY41 377 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 LRP2BPQ9P2M1 347 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 AKT3Q9Y243 479 aa8.18□□□□□ -1.1
MARK3-220ENST00000560417 CCDC163A0A0D9SF12 145 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 PRAMEF1O95521 474 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 FSTP19883 344 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 GRIA2P42262 883 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 NMIQ13287 307 aaPredicted RBP8.17□□□□□ -1.1
MARK3-220ENST00000560417 DOC2BQ14184 412 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 NKPD1Q17RQ9 610 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 RSPO4Q2I0M5 234 aaPredicted RBP8.17□□□□□ -1.1
MARK3-220ENST00000560417 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
MARK3-220ENST00000560417 SYNPOQ8N3V7 929 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 FIBCD1Q8N539 461 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 SHKBP1Q8TBC3 707 aa8.17□□□□□ -1.1
MARK3-220ENST00000560417 DUSP15Q9H1R2 295 aaPredicted RBP8.17□□□□□ -1.1
MARK3-220ENST00000560417 NOL6Q9H6R4 1146 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms