RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 DLK2Q6UY11 383 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 TMTC3Q6ZXV5 915 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 KRT26Q7Z3Y9 468 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 PNMA8AQ86V59 439 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 LRRC47Q8N1G4 583 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 SRBD1Q8N5C6 995 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 FAM184AQ8NB25 1140 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 PHKBQ93100 1093 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 ZNF341Q9BYN7 854 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 GINM1Q9NU53 330 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 MTMR6Q9Y217 621 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 STK36Q9NRP7 1315 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 SSC5DA1L4H1 1573 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 ATAD5Q96QE3 1844 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 UTRNP46939 3433 aa8.42□□□□□ -1.06
HMBOX1-214ENST00000560357 BAZ2BQ9UIF8 2168 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 WDR33Q9C0J8 1336 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 A0A1W2PRG0 241 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 USP2O75604 605 aaPredicted RBP8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 ASNSP08243 561 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 PARP1P09874 1014 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 PDHBP11177 359 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 VEGFAP15692 232 aaPredicted RBP8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 INPP5BP32019 993 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 GNAQP50148 359 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 SLC35G1Q2M3R5 365 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 USP17L2Q6R6M4 530 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 RASGRP2Q7LDG7 609 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 USP48Q86UV5 1035 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 ACER1Q8TDN7 264 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 KLRG1Q96E93 195 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 SLC26A6Q9BXS9 759 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 RNF26Q9BY78 433 aaPredicted RBP8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 RRAGCQ9HB90 399 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 SYNPO2Q9UMS6 1093 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 TMX2Q9Y320 296 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 KIF3AQ9Y496 699 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 MYH6P13533 1939 aa8.41□□□□□ -1.06
HMBOX1-214ENST00000560357 CNTNAP5Q8WYK1 1306 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 KLRF2D3W0D1 207 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 F5H6K3 240 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 UBE2Q2LH0YL09 131 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 PRPF3O43395 683 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 GOLGA8HP0CJ92 632 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 ZSCAN22P10073 491 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 SMARCA1P28370 1054 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 ECE1P42892 770 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 KLRC3Q07444 240 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 ZNF543Q08ER8 600 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 PKN1Q16512 942 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 ASPRV1Q53RT3 343 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 SLFN13Q68D06 897 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 CDC37L1Q7L3B6 337 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 TRIM22Q8IYM9 498 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 GMCL1P1Q8NEA9 526 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 TNPO1Q92973 898 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 CDCA5Q96FF9 252 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 AIFM3Q96NN9 605 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 LZTS2Q9BRK4 669 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 ALG1Q9BT22 464 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 GLIS2Q9BZE0 524 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 ARHGEF10LQ9HCE6 1279 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 FZD1Q9UP38 647 aa8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-214ENST00000560357 DOCK1Q14185 1865 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 FRMPD2Q68DX3 1309 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 hCG_1642624A0A1W2PR95 340 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 CYTH3O43739 400 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 DEXIO95424 95 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 NDUFB10O96000 172 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 AKAP17AQ02040 695 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 PRKG1Q13976 671 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 KIAA1755Q5JYT7 1200 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 GPATCH4Q5T3I0 446 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 CCDC84Q86UT8 332 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 SCYL3Q8IZE3 742 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 FBXO18Q8NFZ0 1043 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 DCAF4Q8WV16 495 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 WASF1Q92558 559 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 GMCL1Q96IK5 515 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 C8orf76Q96K31 380 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 WRNIP1Q96S55 665 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 UBA5Q9GZZ9 404 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 RIOX1Q9H6W3 641 aa8.39□□□□□ -1.07
HMBOX1-214ENST00000560357 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms