RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 PRR29P0C7W0 189 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 CEP57L1Q8IYX8 460 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 SERTAD1Q9UHV2 236 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 CDC25AP30304 524 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 PTGDRQ13258 359 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 DACT2Q5SW24 774 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 OSBPL5Q9H0X9 879 aaPredicted RBP16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 SERPINB13Q9UIV8 391 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 HSP90AA4PQ58FG1 418 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 KRBA2Q6ZNG9 492 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 PODNQ7Z5L7 613 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 CLIP2Q9UDT6 1046 aa16.12■□□□□ 0.17
CARMIL3-203ENST00000560349 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 PTGS1P23219 599 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 STYK1Q6J9G0 422 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 CERS3Q8IU89 383 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 STAMQ92783 540 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 TCP11L1Q9NUJ3 509 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 DDTLA6NHG4 134 aaPredicted RBP16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 ZNF75DP51815 510 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 GABPAQ06546 454 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 DHX58Q96C10 678 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 PIGSQ96S52 555 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 KCNF1Q9H3M0 494 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 GPCPD1Q9NPB8 672 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 PCDHA5Q9Y5H7 936 aa16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 SRPRBQ9Y5M8 271 aaKnown RBP16.11■□□□□ 0.17
CARMIL3-203ENST00000560349 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 SHMT1P34896 483 aa16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 BLIDQ8IZY5 108 aa16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 DNAJC18Q9H819 358 aa16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 C7orf43Q8WVR3 580 aa16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 TDRD3Q9H7E2 651 aaKnown RBP16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
CARMIL3-203ENST00000560349 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 RAD17O75943 681 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 TOP1P11387 765 aaKnown RBP16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 AFMP43652 599 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 LRMPQ12912 555 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 INF2Q27J81 1249 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 CNKSR1Q969H4 720 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 STXBP3O00186 592 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 NAPAP54920 295 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 CCDC186Q7Z3E2 898 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 PLA2G4DQ86XP0 818 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
CARMIL3-203ENST00000560349 PDHBP11177 359 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 BMP6P22004 513 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 SLC16A2P36021 539 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 ARID5BQ14865 1188 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 STRIP1Q5VSL9 837 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 HHIPL2Q6UWX4 724 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 FAM198AQ9UFP1 575 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 IGSF3O75054 1194 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 NLRP12P59046 1061 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 IL17AQ16552 155 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 PCDHA4Q9UN74 947 aa16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 SCAF8Q9UPN6 1271 aaKnown RBP16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
CARMIL3-203ENST00000560349 GDF11O95390 407 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 COA7Q96BR5 231 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 CCDC194A0A1B0GVG4 234 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 ZBTB7AO95365 584 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 ATP1A3P13637 1013 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 GNAQP50148 359 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 POSTNQ15063 836 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 PCDHA6Q9UN73 950 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 PCDHA8Q9Y5H6 950 aa16.07■□□□□ 0.16
CARMIL3-203ENST00000560349 CLRN2A0PK11 232 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 DPEP1P16444 411 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms