RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 DNAJC25Q9H1X3 360 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ATG3Q9NT62 314 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 HMG20BQ9P0W2 317 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 EXOC6BQ9Y2D4 811 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 LRRFIP2Q9Y608 721 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CPS1P31327 1500 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 ADCY9O60503 1353 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 A6NHS1 94 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 USP27XA6NNY8 438 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 BECN2A8MW95 431 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 LARGE1O95461 756 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 TUBBP07437 444 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 AMPD1P23109 780 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 OAS2P29728 719 aaKnown RBP6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 GNA15P30679 374 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 ACTN2P35609 894 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 MAGEA9P43362 315 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 FANCCQ00597 558 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 RESTQ13127 1097 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 TUBB2AQ13885 445 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 BRD3Q15059 726 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 NECTIN1Q15223 517 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 KRT24Q2M2I5 525 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 ERCC6LQ2NKX8 1250 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 SYT10Q6XYQ8 523 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 LYSMD3Q7Z3D4 306 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 RPAINQ86UA6 219 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 UNC5CLQ8IV45 518 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 MNS1Q8NEH6 495 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 BICD2Q8TD16 824 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 AIDAQ96BJ3 306 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 NCAPGQ9BPX3 1015 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 TUBB2BQ9BVA1 445 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 CDK19Q9BWU1 502 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 STK31Q9BXU1 1019 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 NIFKQ9BYG3 293 aaKnown RBP6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 FAM107BQ9H098 131 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 USP54Q70EL1 1684 aa6.86□□□□□ -1.31
SNRPA1-209ENST00000560307 PEAK1Q9H792 1746 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CCDC151A5D8V7 595 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 ZSCAN12O43309 604 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CBFA2T2O43439 604 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 TBC1D8O95759 1140 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 RHOQP17081 205 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 SFPQP23246 707 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 PTGIRP43119 386 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 GTF2A1P52655 376 aaPredicted RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 KRT32Q14532 448 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 SMC1AQ14683 1233 aaKnown RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 ME3Q16798 604 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CCDC30Q5VVM6 783 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 E4F1Q66K89 784 aaPredicted RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CC2D1AQ6P1N0 951 aaPredicted RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 LEKR1Q6ZMV7 388 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CCDC73Q6ZRK6 1079 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CDC37L1Q7L3B6 337 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CKAP2LQ8IYA6 745 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 CCDC191Q8NCU4 936 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 HNRNPLLQ8WVV9 542 aaKnown RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 RABGGTAQ92696 567 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 GTF3C6Q969F1 213 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 SMARCE1Q969G3 411 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 GPATCH3Q96I76 525 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 JAKMIP1Q96N16 626 aaKnown RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 PRAM1Q96QH2 718 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 MYCBPQ99417 103 aaPredicted RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 LLPHQ9BRT6 129 aaKnown RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 ST7Q9NRC1 585 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 RSPH14Q9UHP6 348 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 RCOR1Q9UKL0 485 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 RRP15Q9Y3B9 282 aaKnown RBP6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 A2ML1A8K2U0 1454 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 MRC1P22897 1456 aa6.85□□□□□ -1.31
SNRPA1-209ENST00000560307 OVOS2A0A0J9YW53 1432 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 OVOS2Q6IE36 1432 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 RIMS1Q86UR5 1692 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 PNMA6EA0A0J9YXQ4 647 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 PIK3R2O00459 728 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 EIF1AYO14602 144 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 IKBKBO14920 756 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 HIRAP54198 1017 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 FAM160A1Q05DH4 1040 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 CAMK4Q16566 473 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 DBN1Q16643 649 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 TTC31Q49AM3 519 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 SLC27A3Q5K4L6 730 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 NAA16Q6N069 864 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 BLOC1S2Q6QNY1 142 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 C11orf57Q6ZUT1 292 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 CCAR1Q8IX12 1150 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 DHX40Q8IX18 779 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 NEK11Q8NG66 645 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 RHPN1Q8TCX5 695 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms