RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 PPP1R9AQ9ULJ8 1098 aa21.14■□□□□ 0.97
TPM1-218ENST00000559281 SYNPO2Q9UMS6 1093 aa21.14■□□□□ 0.97
TPM1-218ENST00000559281 COLQQ9Y215 455 aaPredicted RBP21.14■□□□□ 0.97
TPM1-218ENST00000559281 MSCO60682 206 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 PRDM1O75626 825 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 TSPY3P0CV98 308 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 TSPY8P0CW00 308 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 FCER1AP12319 257 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 CCND3P30281 292 aaPredicted RBP21.13■□□□□ 0.97
TPM1-218ENST00000559281 COPB2P35606 906 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 PPARAQ07869 468 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 TMEM132BQ14DG7 1078 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 PPP4R3BQ5MIZ7 849 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 NPLOC4Q8TAT6 608 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 DIS3LQ8TF46 1054 aaKnown RBP21.13■□□□□ 0.97
TPM1-218ENST00000559281 MKL1Q969V6 931 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 C11orf49Q9H6J7 331 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 HELLSQ9NRZ9 838 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 FLRT1Q9NZU1 646 aa21.13■□□□□ 0.97
TPM1-218ENST00000559281 BAZ2AQ9UIF9 1905 aaKnown RBP21.13■□□□□ 0.97
TPM1-218ENST00000559281 MYH7P12883 1935 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 VWA5AO00534 786 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 TTLL1O95922 423 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 CNGA1P29973 690 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 STAT3P40763 770 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 OLFML2BQ68BL8 750 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 LHX8Q68G74 356 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 FBXO28Q9NVF7 368 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 MTMR4Q9NYA4 1195 aa21.12■□□□□ 0.97
TPM1-218ENST00000559281 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 NDUFB10O96000 172 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 RIOX2Q8IUF8 465 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 PRPF38AQ8NAV1 312 aaKnown RBP21.11■□□□□ 0.97
TPM1-218ENST00000559281 NEDD1Q8NHV4 660 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 CEP95Q96GE4 821 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 SLF1Q9BQI6 1058 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 LNPKQ9C0E8 428 aa21.11■□□□□ 0.97
TPM1-218ENST00000559281 CTDP1Q9Y5B0 961 aaPredicted RBP21.11■□□□□ 0.97
TPM1-218ENST00000559281 CYP2C19P33261 490 aa21.1■□□□□ 0.97
TPM1-218ENST00000559281 TFAP4Q01664 338 aa21.1■□□□□ 0.97
TPM1-218ENST00000559281 CHRDL2Q6WN34 429 aa21.1■□□□□ 0.97
TPM1-218ENST00000559281 DDX20Q9UHI6 824 aaKnown RBP21.1■□□□□ 0.97
TPM1-218ENST00000559281 PLXNB2O15031 1838 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 TRIM6-TRIM34B2RNG4 842 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 COBLO75128 1261 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
TPM1-218ENST00000559281 KCTD2Q14681 263 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 B4GALNT3Q6L9W6 998 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 CCDC129Q6ZRS4 1044 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 MMP19Q99542 508 aa21.09■□□□□ 0.97
TPM1-218ENST00000559281 NUP88Q99567 741 aaPredicted RBP21.09■□□□□ 0.97
TPM1-218ENST00000559281 CEP290O15078 2479 aa21.08■□□□□ 0.97
TPM1-218ENST00000559281 ZBED4O75132 1171 aa21.08■□□□□ 0.97
TPM1-218ENST00000559281 FAM47AQ5JRC9 791 aa21.08■□□□□ 0.97
TPM1-218ENST00000559281 CHD1LQ86WJ1 897 aa21.08■□□□□ 0.97
TPM1-218ENST00000559281 GMCL1P1Q8NEA9 526 aa21.08■□□□□ 0.97
TPM1-218ENST00000559281 FEM1BQ9UK73 627 aa21.08■□□□□ 0.97
TPM1-218ENST00000559281 TSPY2A6NKD2 308 aa21.07■□□□□ 0.96
TPM1-218ENST00000559281 IGHA2P01877 340 aa21.07■□□□□ 0.96
TPM1-218ENST00000559281 ALX1Q15699 326 aa21.07■□□□□ 0.96
TPM1-218ENST00000559281 EXOC6Q8TAG9 804 aa21.07■□□□□ 0.96
TPM1-218ENST00000559281 RILPL2Q969X0 211 aa21.07■□□□□ 0.96
TPM1-218ENST00000559281 TEX13BQ9BXU2 312 aa21.07■□□□□ 0.96
TPM1-218ENST00000559281 ZNF214Q9UL59 606 aaPredicted RBP21.07■□□□□ 0.96
TPM1-218ENST00000559281 DIS3Q9Y2L1 958 aaKnown RBP21.07■□□□□ 0.96
TPM1-218ENST00000559281 CYBAP13498 195 aa21.06■□□□□ 0.96
TPM1-218ENST00000559281 SLFN13Q68D06 897 aa21.06■□□□□ 0.96
TPM1-218ENST00000559281 REPS2Q8NFH8 660 aa21.06■□□□□ 0.96
TPM1-218ENST00000559281 MAML3Q96JK9 1138 aa21.06■□□□□ 0.96
TPM1-218ENST00000559281 ANAPC4Q9UJX5 808 aa21.06■□□□□ 0.96
TPM1-218ENST00000559281 PLIN4Q96Q06 1357 aa21.06■□□□□ 0.96
TPM1-218ENST00000559281 ATP2A1O14983 1001 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 IGHDP01880 384 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 FDX1P10109 184 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 COL6A1P12109 1028 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 BMP3P12645 472 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 MFAP1P55081 439 aaKnown RBP21.05■□□□□ 0.96
TPM1-218ENST00000559281 NUCB1Q02818 461 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 C7orf61Q8IZ16 206 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 LRRC47Q8N1G4 583 aaKnown RBP21.05■□□□□ 0.96
TPM1-218ENST00000559281 ARRDC4Q8NCT1 418 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 KIFC2Q96AC6 838 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 RBM27Q9P2N5 1060 aaKnown RBP21.05■□□□□ 0.96
TPM1-218ENST00000559281 NRBP1Q9UHY1 535 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 MYH8P13535 1937 aa21.05■□□□□ 0.96
TPM1-218ENST00000559281 FOXP2O15409 715 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
TPM1-218ENST00000559281 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 SNRNP48Q6IEG0 339 aaKnown RBP21.04■□□□□ 0.96
TPM1-218ENST00000559281 TRPV1Q8NER1 839 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 CHURC1Q8WUH1 139 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 DDX11Q96FC9 970 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 OSBPL3Q9H4L5 887 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 PCDH10Q9P2E7 1040 aa21.04■□□□□ 0.96
TPM1-218ENST00000559281 ISY1Q9ULR0 285 aaKnown RBP21.04■□□□□ 0.96
TPM1-218ENST00000559281 STX8Q9UNK0 236 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms