RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 ZNF365Q70YC5 407 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 BPHLQ86WA6 291 aaPredicted RBP9.4□□□□□ -0.9
USP3-211ENST00000559257 LRRC45Q96CN5 670 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 IFT43Q96FT9 208 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 FGD4Q96M96 766 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 FAM192AQ9GZU8 254 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 EHD4Q9H223 541 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 NPATQ14207 1427 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 SAMD9LQ8IVG5 1584 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 CDC42BPBQ9Y5S2 1711 aa9.4□□□□□ -0.9
USP3-211ENST00000559257 GOLGA6L10A0A0M3HER8 536 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 ARID3CA6NKF2 412 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 ACTN4O43707 911 aaKnown RBP9.4□□□□□ -0.91
USP3-211ENST00000559257 STAM2O75886 525 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 LDHAP00338 332 aaKnown RBP9.4□□□□□ -0.91
USP3-211ENST00000559257 ENDOUP21128 410 aaKnown RBP9.4□□□□□ -0.91
USP3-211ENST00000559257 GGCXP38435 758 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 SCTRP47872 440 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 SEPT2Q15019 361 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 ALDH1L2Q3SY69 923 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 CCDC153Q494R4 210 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 TMCO4Q5TGY1 634 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 ALS2CLQ60I27 953 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 NEPROQ6NW34 567 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.91
USP3-211ENST00000559257 CLASRPQ8N2M8 674 aaKnown RBP9.4□□□□□ -0.91
USP3-211ENST00000559257 CNBD1Q8NA66 436 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 IRGQQ8WZA9 623 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 JPH4Q96JJ6 628 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 SUCLA2Q9P2R7 463 aaPredicted RBP9.4□□□□□ -0.91
USP3-211ENST00000559257 CTNNAL1Q9UBT7 734 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 BAIAP2L1Q9UHR4 511 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 MAGI2Q86UL8 1455 aa9.4□□□□□ -0.91
USP3-211ENST00000559257 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 CFAP73A6NFT4 308 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 RGL2O15211 777 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 FAM107AO95990 144 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 ALDH2P05091 517 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 HSPA8P11142 646 aaKnown RBP9.39□□□□□ -0.91
USP3-211ENST00000559257 GSPT1P15170 499 aaKnown RBP9.39□□□□□ -0.91
USP3-211ENST00000559257 POLE2P56282 527 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 TUBA1BP68363 451 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 PIP4K2BP78356 416 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 KCNA1Q09470 495 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 ITGA7Q13683 1181 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 ME3Q16798 604 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP3-211ENST00000559257 SLC44A4Q53GD3 710 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 SPECC1Q5M775 1068 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 ZMYM1Q5SVZ6 1142 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 TUBA1AQ71U36 451 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 GDAP1Q8TB36 358 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 MPP4Q96JB8 637 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 WDR24Q96S15 920 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 VCXQ9H320 206 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 NRXN1Q9ULB1 1477 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 AGPSO00116 658 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 DIAPH2O60879 1101 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 TBCAO75347 108 aaKnown RBP9.39□□□□□ -0.91
USP3-211ENST00000559257 FGFR1OPO95684 399 aaKnown RBP9.39□□□□□ -0.91
USP3-211ENST00000559257 GSTA1P08263 222 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
USP3-211ENST00000559257 FUT4P22083 530 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 KRT9P35527 623 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 TTC22Q5TAA0 569 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 TBC1D9BQ66K14 1250 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 NEK10Q6ZWH5 1172 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 CKAP2LQ8IYA6 745 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 AZIN2Q96A70 460 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 NAF1Q96HR8 494 aaKnown RBP9.39□□□□□ -0.91
USP3-211ENST00000559257 CDK5RAP3Q96JB5 506 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 COMMD8Q9NX08 183 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 DUOX2Q9NRD8 1548 aa9.39□□□□□ -0.91
USP3-211ENST00000559257 FANCAO15360 1455 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 DYTNA2CJ06 578 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 DNM1LO00429 736 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 BAG3O95817 575 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 EIF2S2P20042 333 aaKnown RBP9.38□□□□□ -0.91
USP3-211ENST00000559257 S100A1P23297 94 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 GUCY2FP51841 1108 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 CDK17Q00537 523 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 AKAP17AQ02040 695 aaKnown RBP9.38□□□□□ -0.91
USP3-211ENST00000559257 SUZ12Q15022 739 aaKnown RBP9.38□□□□□ -0.91
USP3-211ENST00000559257 ZNF804AQ7Z570 1209 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 C11orf74Q86VG3 221 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 WDR75Q8IWA0 830 aaKnown RBP9.38□□□□□ -0.91
USP3-211ENST00000559257 WDR60Q8WVS4 1066 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 RPGRIP1Q96KN7 1286 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 INIPQ9NRY2 104 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 RHBDL2Q9NX52 303 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 PPP2R2CQ9Y2T4 447 aa9.38□□□□□ -0.91
USP3-211ENST00000559257 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms