RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 ARHGEF6Q15052 776 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 TAF1CQ15572 869 aaPredicted RBP7.57□□□□□ -1.2
MARK3-216ENST00000558953 MYSM1Q5VVJ2 828 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 SPTY2D1Q68D10 685 aaPredicted RBP7.57□□□□□ -1.2
MARK3-216ENST00000558953 OTOP1Q7RTM1 612 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 ZKSCAN4Q969J2 545 aaPredicted RBP7.57□□□□□ -1.2
MARK3-216ENST00000558953 XAGE2Q96GT9 111 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 ZFYVE28Q9HCC9 887 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 USP40Q9NVE5 1235 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 ABCF2Q9UG63 623 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 TRIM17Q9Y577 477 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 SNCAIPQ9Y6H5 919 aa7.57□□□□□ -1.2
MARK3-216ENST00000558953 ENTPD3O75355 529 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 HNRNPUQ00839 825 aaKnown RBP eCLIP7.56□□□□□ -1.2
MARK3-216ENST00000558953 PPATQ06203 517 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 TCP10Q12799 353 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 NFIAQ12857 509 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 G3BP1Q13283 466 aaKnown RBP eCLIP7.56□□□□□ -1.2
MARK3-216ENST00000558953 RASGRF1Q13972 1273 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 GORABQ5T7V8 394 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 FOXR1Q6PIV2 292 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 MIGA2Q7L4E1 593 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 SH3BP5LQ7L8J4 393 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 DZIP1Q86YF9 867 aaKnown RBP7.56□□□□□ -1.2
MARK3-216ENST00000558953 PROCA1Q8NCQ7 364 aaPredicted RBP7.56□□□□□ -1.2
MARK3-216ENST00000558953 CD99L2Q8TCZ2 262 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 CLUAP1Q96AJ1 413 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 NEUROD6Q96NK8 337 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 IDI2Q9BXS1 227 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 KRTAP9-9Q9BYP9 154 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 TBC1D2Q9BYX2 928 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 EFCC1Q9HA90 598 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 ZCCHC17Q9NP64 241 aaKnown RBP7.56□□□□□ -1.2
MARK3-216ENST00000558953 ZNF112Q9UJU3 913 aa7.56□□□□□ -1.2
MARK3-216ENST00000558953 KIAA0100Q14667 2235 aaKnown RBP7.56□□□□□ -1.2
MARK3-216ENST00000558953 GAKO14976 1311 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 PNMA6EA0A0J9YXQ4 647 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 LDHCP07864 332 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 INPP5BP32019 993 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 RGS3P49796 1198 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 FAM43AQ8N2R8 423 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 TMEM57Q8N5G2 664 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 ZNF837Q96EG3 531 aaPredicted RBP7.55□□□□□ -1.2
MARK3-216ENST00000558953 TNNQ9UQP3 1299 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 PTPN22Q9Y2R2 807 aa7.55□□□□□ -1.2
MARK3-216ENST00000558953 MROH7-TTC4A0A0A0MT08 1334 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 RBBP6Q7Z6E9 1792 aaKnown RBP7.54□□□□□ -1.2
MARK3-216ENST00000558953 BTBD19C9JJ37 291 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 TLR2O60603 784 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 MAP4K4O95819 1239 aaPredicted RBP7.54□□□□□ -1.2
MARK3-216ENST00000558953 UQCRFS1P1P0C7P4 283 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 BTDP43251 543 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 GSTO1P78417 241 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
MARK3-216ENST00000558953 ANKRD23Q86SG2 305 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
MARK3-216ENST00000558953 ZFPM1Q8IX07 1006 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 SPATA5Q8NB90 893 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 GPR108Q9NPR9 543 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 HMG20BQ9P0W2 317 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 LIMD1Q9UGP4 676 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 KCNH4Q9UQ05 1017 aa7.54□□□□□ -1.2
MARK3-216ENST00000558953 GPR75-ASB3A0A0A6YYF3 556 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 CXCL11O14625 94 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 ARID4AP29374 1257 aaPredicted RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 ATP8B2P98198 1209 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 MECOMQ03112 1051 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 KIF22Q14807 665 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 SKIV2LQ15477 1246 aaKnown RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 FTSJ3Q8IY81 847 aaKnown RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 SSH3Q8TE77 659 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.53□□□□□ -1.2
MARK3-216ENST00000558953 ZNF395Q9H8N7 513 aaPredicted RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 PICK1Q9NRD5 415 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 RAI14Q9P0K7 980 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.53□□□□□ -1.2
MARK3-216ENST00000558953 RFX7Q2KHR2 1363 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 ATRNL1Q5VV63 1379 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 DOCK1Q14185 1865 aa7.53□□□□□ -1.2
MARK3-216ENST00000558953 PTPRFP10586 1907 aa7.52□□□□□ -1.2
MARK3-216ENST00000558953 COL2A1P02458 1487 aaPredicted RBP7.52□□□□□ -1.21
MARK3-216ENST00000558953 PDHXO00330 501 aa7.52□□□□□ -1.21
MARK3-216ENST00000558953 OIP5O43482 229 aa7.52□□□□□ -1.21
MARK3-216ENST00000558953 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.21
MARK3-216ENST00000558953 SURF6O75683 361 aaKnown RBP7.52□□□□□ -1.21
MARK3-216ENST00000558953 GNRH1P01148 92 aa7.52□□□□□ -1.21
MARK3-216ENST00000558953 COL8A1P27658 744 aa7.52□□□□□ -1.21
MARK3-216ENST00000558953 PRMT2P55345 433 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms