RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
VPS18-203ENST00000558855 LPAR1Q92633 364 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 ADAMTS5Q9UNA0 930 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
VPS18-203ENST00000558855 GDF15Q99988 308 aa16.25■□□□□ 0.19
VPS18-203ENST00000558855 LCTP09848 1927 aa16.25■□□□□ 0.19
VPS18-203ENST00000558855 PRAMEF19Q5SWL8 479 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 NCAPG2Q86XI2 1143 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 SHCBP1Q8NEM2 672 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 HOXC10Q9NYD6 342 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 DDX20Q9UHI6 824 aaKnown RBP16.24■□□□□ 0.19
VPS18-203ENST00000558855 ZNF214Q9UL59 606 aaPredicted RBP16.24■□□□□ 0.19
VPS18-203ENST00000558855 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 LRRC37A2A6NM11 1700 aa16.24■□□□□ 0.19
VPS18-203ENST00000558855 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
VPS18-203ENST00000558855 ZMYM1Q5SVZ6 1142 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 MFSD14CQ5VZR4 134 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 IFNL3Q8IZI9 196 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 GPATCH3Q96I76 525 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 LRCH3Q96II8 777 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 INCENPQ9NQS7 918 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
VPS18-203ENST00000558855 VWA5AO00534 786 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 RAD21O60216 631 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 NDUFB10O96000 172 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 PGK2P07205 417 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 CAPN2P17655 700 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 MX1P20591 662 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 CNGA1P29973 690 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 OLFML2BQ68BL8 750 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 GIMAP6Q6P9H5 292 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 MB21D1Q8N884 522 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 MAML3Q96JK9 1138 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 SH2D4AQ9H788 454 aa16.22■□□□□ 0.19
VPS18-203ENST00000558855 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
VPS18-203ENST00000558855 TAL1P17542 331 aaPredicted RBP16.21■□□□□ 0.19
VPS18-203ENST00000558855 MAGEA10P43363 369 aaPredicted RBP16.21■□□□□ 0.19
VPS18-203ENST00000558855 TDO2P48775 406 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 LRRC47Q8N1G4 583 aaKnown RBP16.21■□□□□ 0.19
VPS18-203ENST00000558855 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 FSD1Q9BTV5 496 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 NYAP2Q9P242 653 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
VPS18-203ENST00000558855 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
VPS18-203ENST00000558855 F5H6K3 240 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 KLRC3Q07444 240 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 GJC2Q5T442 439 aaPredicted RBP16.2■□□□□ 0.18
VPS18-203ENST00000558855 RIOX2Q8IUF8 465 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
VPS18-203ENST00000558855 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
VPS18-203ENST00000558855 MROH8Q9H579 483 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 MKNK2Q9HBH9 465 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 GOPCQ9HD26 462 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 PLIN4Q96Q06 1357 aa16.2■□□□□ 0.18
VPS18-203ENST00000558855 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
VPS18-203ENST00000558855 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
VPS18-203ENST00000558855 STRNO43815 780 aa16.19■□□□□ 0.18
VPS18-203ENST00000558855 APPP05067 770 aa16.19■□□□□ 0.18
VPS18-203ENST00000558855 ATN1P54259 1190 aaPredicted RBP16.19■□□□□ 0.18
VPS18-203ENST00000558855 ANKRD45Q5TZF3 282 aa16.19■□□□□ 0.18
VPS18-203ENST00000558855 SENP6Q9GZR1 1112 aaPredicted RBP16.19■□□□□ 0.18
VPS18-203ENST00000558855 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
VPS18-203ENST00000558855 CTDSPL2Q05D32 466 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 PPARAQ07869 468 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 ZNF792Q3KQV3 632 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 ABRAQ8N0Z2 381 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 FGD4Q96M96 766 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 MMP19Q99542 508 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 COL6A3P12111 3177 aa16.18■□□□□ 0.18
VPS18-203ENST00000558855 ERC2O15083 957 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 NMT2O60551 498 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 FCER1AP12319 257 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 GNAT2P19087 354 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 STAT3P40763 770 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
VPS18-203ENST00000558855 FAM227BQ96M60 508 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
VPS18-203ENST00000558855 A0A0D9SFI3 127 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 DNM1LO00429 736 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 SEPT4O43236 478 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 SLC25A27O95847 323 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 BMP8BP34820 402 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 PDE1AP54750 535 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
VPS18-203ENST00000558855 SNRNP48Q6IEG0 339 aaKnown RBP16.16■□□□□ 0.18
VPS18-203ENST00000558855 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 MKL1Q969V6 931 aa16.16■□□□□ 0.18
VPS18-203ENST00000558855 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms