RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NPLOC4Q8TAT6 608 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 CEP95Q96GE4 821 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 FAM227BQ96M60 508 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 NYAP2Q9P242 653 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 CLIP2Q9UDT6 1046 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 FOXP2O15409 715 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 SLC34A2O95436 690 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 NDUFB10O96000 172 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 TSPY3P0CV98 308 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 TSPY8P0CW00 308 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 CYP2C19P33261 490 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 PDE4BQ07343 736 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 TMEM132BQ14DG7 1078 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 MFSD14CQ5VZR4 134 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 SHCBP1Q8NEM2 672 aa14.19□□□□□ -0.14
HERC1-202ENST00000558324 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
HERC1-202ENST00000558324 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 F5H6K3 240 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 HOXC6P09630 235 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 CNGA1P29973 690 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 TFAP4Q01664 338 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 CTDSPL2Q05D32 466 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 KLRC3Q07444 240 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 HABP4Q5JVS0 413 aaKnown RBP14.18□□□□□ -0.14
HERC1-202ENST00000558324 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 RILPL2Q969X0 211 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 CHMP4CQ96CF2 233 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 MROH8Q9H579 483 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 PPP1R9AQ9ULJ8 1098 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 ISY1Q9ULR0 285 aaKnown RBP14.18□□□□□ -0.14
HERC1-202ENST00000558324 COLQQ9Y215 455 aaPredicted RBP14.18□□□□□ -0.14
HERC1-202ENST00000558324 PARP14Q460N5 1801 aa14.18□□□□□ -0.14
HERC1-202ENST00000558324 VWA5AO00534 786 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 EVI5O60447 810 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 TTLL1O95922 423 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
HERC1-202ENST00000558324 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
HERC1-202ENST00000558324 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 SLF1Q9BQI6 1058 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 INCENPQ9NQS7 918 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 MTMR4Q9NYA4 1195 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 OGDHLQ9ULD0 1010 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 NR2E3Q9Y5X4 410 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 PLIN4Q96Q06 1357 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 ZNF236Q9UL36 1845 aa14.17□□□□□ -0.14
HERC1-202ENST00000558324 STRNO43815 780 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 COBLO75128 1261 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 FCER1AP12319 257 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 CAPN2P17655 700 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 SLC4A3P48751 1232 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 MNX1P50219 401 aaPredicted RBP14.16□□□□□ -0.14
HERC1-202ENST00000558324 NUCB1Q02818 461 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 KIFC2Q96AC6 838 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 MMP19Q99542 508 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 NBPF3Q9H094 633 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 C11orf49Q9H6J7 331 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 ADAMTS5Q9UNA0 930 aa14.16□□□□□ -0.14
HERC1-202ENST00000558324 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
HERC1-202ENST00000558324 TSPY2A6NKD2 308 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 SLC25A27O95847 323 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 PGK2P07205 417 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 STAT3P40763 770 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 MCMDC2Q4G0Z9 681 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 SLFN13Q68D06 897 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 LHX8Q68G74 356 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
HERC1-202ENST00000558324 RIOX2Q8IUF8 465 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 PLEKHM2Q8IWE5 1019 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 C7orf61Q8IZ16 206 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 TRPV1Q8NER1 839 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 REPS2Q8NFH8 660 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 TOMM22Q9NS69 142 aa14.15□□□□□ -0.14
HERC1-202ENST00000558324 ZNF214Q9UL59 606 aaPredicted RBP14.15□□□□□ -0.14
HERC1-202ENST00000558324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
HERC1-202ENST00000558324 CTDP1Q9Y5B0 961 aaPredicted RBP14.15□□□□□ -0.14
HERC1-202ENST00000558324 MYH4Q9Y623 1939 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
HERC1-202ENST00000558324 NMT2O60551 498 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 CYBAP13498 195 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 KCTD2Q14681 263 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
HERC1-202ENST00000558324 ANO1Q5XXA6 986 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 OLFML2BQ68BL8 750 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 SNRNP48Q6IEG0 339 aaKnown RBP14.14□□□□□ -0.15
HERC1-202ENST00000558324 ABRAQ8N0Z2 381 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 CPXCR1Q8N123 301 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 PRPF38AQ8NAV1 312 aaKnown RBP14.14□□□□□ -0.15
HERC1-202ENST00000558324 GMCL1P1Q8NEA9 526 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 MKL1Q969V6 931 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 SLC5A4Q9NY91 659 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 DDX20Q9UHI6 824 aaKnown RBP14.14□□□□□ -0.15
HERC1-202ENST00000558324 STX8Q9UNK0 236 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 PFASO15067 1338 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms