RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 KSR2Q6VAB6 950 aa12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 ANGEL1Q9UNK9 670 aaKnown RBP12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 DCTN3O75935 186 aa12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 STX8Q9UNK0 236 aa12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 MAPK13O15264 365 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 BCRP11274 1271 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 PPARDQ03181 441 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 MORC3Q14149 939 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TTC38Q5R3I4 469 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TEX9Q8N6V9 391 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 LINS1Q8NG48 757 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 EPB41L5Q9HCM4 733 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 GIPC1O14908 333 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TADA3O75528 432 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 MYO1EQ12965 1108 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 KRT80Q6KB66 452 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TRIML2Q8N7C3 387 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 DPH5Q9H2P9 285 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TSPY3P0CV98 308 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TSPY8P0CW00 308 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 EEF1DP29692 281 aaKnown RBP12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 GSTO1P78417 241 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 KRT40Q6A162 431 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 KRT12Q99456 494 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 TTC4O95801 387 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 PDE6CP51160 858 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 CUL1Q13616 776 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 PKP1Q13835 747 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
CSPG4P12-201ENST00000558282 LMNB1P20700 586 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 CUL4AQ13619 759 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 PALM2Q8IXS6 379 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 PDZD8Q8NEN9 1154 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 KRT3P12035 628 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 HSPA6P17066 643 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 ME3Q16798 604 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 ANKRD7Q92527 254 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 SERTAD1Q9UHV2 236 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 ACTN3Q08043 901 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 OGFOD1Q8N543 542 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 FANCAO15360 1455 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 GCC2Q8IWJ2 1684 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 STXBP3O00186 592 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 OCA2Q04671 838 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 TMCO4Q5TGY1 634 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 USP28Q96RU2 1077 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 FAM135BQ49AJ0 1406 aa12.9□□□□□ -0.34
CSPG4P12-201ENST00000558282 NPC1L1Q9UHC9 1359 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 ADCY8P40145 1251 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 INPP1P49441 399 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 CRYMQ14894 314 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 VSTM4Q8IW00 320 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 LRGUKQ96M69 825 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 PSMD2Q13200 908 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 NME9Q86XW9 330 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 CDC5LQ99459 802 aaKnown RBP12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 ADCY2Q08462 1091 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 BZW2Q9Y6E2 419 aaKnown RBP12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 GMNCA6NCL1 334 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 SPAG7O75391 227 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 STAT1P42224 750 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 PDCLQ13371 301 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 CCDC89Q8N998 374 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 NEK9Q8TD19 979 aa12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 NOVA2Q9UNW9 492 aaKnown RBP12.89□□□□□ -0.35
CSPG4P12-201ENST00000558282 ANKRD65E5RJM6 399 aa12.88□□□□□ -0.35
CSPG4P12-201ENST00000558282 CYP7A1P22680 504 aa12.88□□□□□ -0.35
CSPG4P12-201ENST00000558282 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
CSPG4P12-201ENST00000558282 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
CSPG4P12-201ENST00000558282 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P12-201ENST00000558282 PBKQ96KB5 322 aa12.88□□□□□ -0.35
CSPG4P12-201ENST00000558282 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms