RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 RTP1P59025 263 aa19.9■□□□□ 0.78
NEK9-211ENST00000557673 UBE3CQ15386 1083 aa19.9■□□□□ 0.78
NEK9-211ENST00000557673 TRPV1Q8NER1 839 aa19.9■□□□□ 0.78
NEK9-211ENST00000557673 OSBPL3Q9H4L5 887 aa19.9■□□□□ 0.78
NEK9-211ENST00000557673 ARHGEF10LQ9HCE6 1279 aa19.9■□□□□ 0.78
NEK9-211ENST00000557673 A0A1W2PRG0 241 aa19.89■□□□□ 0.77
NEK9-211ENST00000557673 PLS1Q14651 629 aa19.89■□□□□ 0.77
NEK9-211ENST00000557673 GJC2Q5T442 439 aaPredicted RBP19.89■□□□□ 0.77
NEK9-211ENST00000557673 DNAH12Q6ZR08 3092 aa19.89■□□□□ 0.77
NEK9-211ENST00000557673 FLOT1O75955 427 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 DSG3P32926 999 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 ZSCAN25Q6NSZ9 544 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 SLC39A5Q6ZMH5 540 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 AMOTL1Q8IY63 956 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 KBTBD3Q8NAB2 608 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 PUS7LQ9H0K6 701 aaKnown RBP19.88■□□□□ 0.77
NEK9-211ENST00000557673 ATP11BQ9Y2G3 1177 aa19.88■□□□□ 0.77
NEK9-211ENST00000557673 SLC25A27O95847 323 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 FCER1AP12319 257 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 NCAPG2Q86XI2 1143 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 DDRGK1Q96HY6 314 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 CCDC17Q96LX7 622 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 ATP8A2Q9NTI2 1148 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 FRMPD3Q5JV73 1810 aa19.87■□□□□ 0.77
NEK9-211ENST00000557673 CYP2D7A0A087X1C5 515 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 COBLO75128 1261 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 ICA1Q05084 483 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 ZNF697Q5TEC3 545 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 SLC44A5Q8NCS7 719 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 NRBP1Q9UHY1 535 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 TMX2Q9Y320 296 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 SLC4A4Q9Y6R1 1079 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 ZNF236Q9UL36 1845 aa19.86■□□□□ 0.77
NEK9-211ENST00000557673 MYH8P13535 1937 aa19.85■□□□□ 0.77
NEK9-211ENST00000557673 SMIM22K7EJ46 135 aa19.85■□□□□ 0.77
NEK9-211ENST00000557673 MYCNP04198 464 aaPredicted RBP19.85■□□□□ 0.77
NEK9-211ENST00000557673 DYNLL2Q96FJ2 89 aa19.85■□□□□ 0.77
NEK9-211ENST00000557673 VCPKMTQ9H867 229 aa19.85■□□□□ 0.77
NEK9-211ENST00000557673 PRDM5Q9NQX1 630 aaPredicted RBP19.85■□□□□ 0.77
NEK9-211ENST00000557673 WDR46O15213 610 aaKnown RBP19.84■□□□□ 0.77
NEK9-211ENST00000557673 SNX17Q15036 470 aa19.84■□□□□ 0.77
NEK9-211ENST00000557673 C1orf53Q5VUE5 145 aa19.84■□□□□ 0.77
NEK9-211ENST00000557673 SPICE1Q8N0Z3 855 aa19.84■□□□□ 0.77
NEK9-211ENST00000557673 ATG4CQ96DT6 458 aa19.84■□□□□ 0.77
NEK9-211ENST00000557673 MAML3Q96JK9 1138 aa19.84■□□□□ 0.77
NEK9-211ENST00000557673 USP17L12C9JPN9 530 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 USP17L21D6R901 530 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 RNF113AO15541 343 aaKnown RBP19.83■□□□□ 0.77
NEK9-211ENST00000557673 LRRC41Q15345 812 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 ANO1Q5XXA6 986 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.83■□□□□ 0.77
NEK9-211ENST00000557673 APPBP2Q92624 585 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 OSBP2Q969R2 916 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 GUCD1Q96NT3 240 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 FSD1Q9BTV5 496 aa19.83■□□□□ 0.77
NEK9-211ENST00000557673 RARBP10826 455 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 AKR1B1P15121 316 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 COPB2P35606 906 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 ADCYAP1R1P41586 468 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 TRIM60Q495X7 471 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 KIAA1755Q5JYT7 1200 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 TTC22Q5TAA0 569 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 C12orf60Q5U649 245 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 SAMD1Q6SPF0 538 aaPredicted RBP19.82■□□□□ 0.76
NEK9-211ENST00000557673 SKAP1Q86WV1 359 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 SIAH1Q8IUQ4 282 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 EVI5LQ96CN4 794 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 FAM161BQ96MY7 647 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 STRBPQ96SI9 672 aaKnown RBP19.82■□□□□ 0.76
NEK9-211ENST00000557673 MMP19Q99542 508 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 KANSL2Q9H9L4 492 aa19.82■□□□□ 0.76
NEK9-211ENST00000557673 ZFYP08048 801 aaPredicted RBP19.81■□□□□ 0.76
NEK9-211ENST00000557673 GSPT1P15170 499 aaKnown RBP19.81■□□□□ 0.76
NEK9-211ENST00000557673 CDK8P49336 464 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 KCTD2Q14681 263 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 TMEM132BQ14DG7 1078 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 SHHQ15465 462 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 PRAMEF19Q5SWL8 479 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 RNF180Q86T96 592 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 GOPCQ9HD26 462 aa19.81■□□□□ 0.76
NEK9-211ENST00000557673 DIS3Q9Y2L1 958 aaKnown RBP19.81■□□□□ 0.76
NEK9-211ENST00000557673 LAMA2P24043 3122 aaKnown RBP19.8■□□□□ 0.76
NEK9-211ENST00000557673 M0R2C6 588 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 FAM47AQ5JRC9 791 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 CTR9Q6PD62 1173 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 RIOX2Q8IUF8 465 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 BADQ92934 168 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 FERMT2Q96AC1 680 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 XPNPEP3Q9NQH7 507 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 PDLIM7Q9NR12 457 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 ADAMTS5Q9UNA0 930 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 TACC3Q9Y6A5 838 aa19.8■□□□□ 0.76
NEK9-211ENST00000557673 A0A0G2JMZ2 1700 aa19.79■□□□□ 0.76
NEK9-211ENST00000557673 GPAA1O43292 621 aa19.79■□□□□ 0.76
NEK9-211ENST00000557673 EEF2P13639 858 aaKnown RBP19.79■□□□□ 0.76
NEK9-211ENST00000557673 STAT3P40763 770 aa19.79■□□□□ 0.76
NEK9-211ENST00000557673 SMAD3P84022 425 aaKnown RBP19.79■□□□□ 0.76
NEK9-211ENST00000557673 LRRFIP1Q32MZ4 808 aaKnown RBP19.79■□□□□ 0.76
NEK9-211ENST00000557673 C16orf86Q6ZW13 317 aa19.79■□□□□ 0.76
NEK9-211ENST00000557673 CLEC10AQ8IUN9 316 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms