RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 TMC6Q7Z403 805 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 CCDC51Q96ER9 411 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 MAP3K14Q99558 947 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 UBAC1Q9BSL1 405 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 UTP14AQ9BVJ6 771 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 DDX41Q9UJV9 622 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 SRPRBQ9Y5M8 271 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 KIAA0100Q14667 2235 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 PAPPA2Q9BXP8 1791 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 CEP290O15078 2479 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 B4E1Z4 1266 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 GPR25O00155 361 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 GALR2O43603 387 aaPredicted RBP8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 FKTNO75072 461 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 TDO2P48775 406 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 SPAG1Q07617 926 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 SCARF1Q14162 830 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 CFAP100Q494V2 611 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 FILIP1LQ4L180 1135 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 CLEC4GQ6UXB4 293 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 NBPF11Q86T75 865 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 IQCA1Q86XH1 822 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 HOMER1Q86YM7 354 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 CERS3Q8IU89 383 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 TBC1D10CQ8IV04 446 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 VSTM4Q8IW00 320 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 KRT222Q8N1A0 295 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 ANKRD20A12PQ8NF67 263 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 ZC3H15Q8WU90 426 aaKnown RBP8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 SMARCE1Q969G3 411 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 FTOQ9C0B1 505 aaKnown RBP eCLIP8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 PIH1D3Q9NQM4 214 aaKnown RBP8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 PRDM6Q9NQX0 595 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 AATFQ9NY61 560 aaKnown RBP eCLIP8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 TRIM17Q9Y577 477 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 NEDD4P46934 1319 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 UBN2Q6ZU65 1347 aa8.29□□□□□ -1.08
MTHFD1-215ENST00000557370 A0A0C4DFX4 3053 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 TRIM75PA6NK02 468 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 EFCAB8A8MWE9 144 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 WDHD1O75717 1129 aaPredicted RBP8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 DDAH1O94760 285 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 CHGBP05060 677 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 MYL1P05976 194 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 CDK11BP21127 795 aaKnown RBP8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 PHKA1P46020 1223 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 FOSBP53539 338 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 EIF5P55010 431 aaKnown RBP8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 TRIM14Q14142 442 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 POSTNQ15063 836 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 SPECC1LQ69YQ0 1117 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 SHC4Q6S5L8 630 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 CYB5R4Q7L1T6 521 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 KRT26Q7Z3Y9 468 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 CATIPQ7Z7H3 387 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 MICU3Q86XE3 530 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 DIS3L2Q8IYB7 885 aaKnown RBP8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 FANCBQ8NB91 859 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 GSDMAQ96QA5 445 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 PSMD1Q99460 953 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 SLC26A6Q9BXS9 759 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 RMND1Q9NWS8 449 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 ZSWIM5Q9P217 1185 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 DNAI1Q9UI46 699 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 DENND2AQ9ULE3 1009 aa8.28□□□□□ -1.08
MTHFD1-215ENST00000557370 MYH6P13533 1939 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 ECM29Q5VYK3 1845 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 SZT2Q5T011 3432 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 GSG1L2A8MUP6 293 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 KIF28PB7ZC32 967 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 MBD4O95243 580 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 FGRP09769 529 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 COL9A1P20849 921 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 CALML3P27482 149 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 ALDH1B1P30837 517 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 KRT2P35908 639 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 PPP1R2P41236 205 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 SARSP49591 514 aaKnown RBP8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 GMPSP49915 693 aaPredicted RBP8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 PLCD1P51178 756 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 CAVIN4Q5BKX8 364 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 E4F1Q66K89 784 aaPredicted RBP8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 GALNT17Q6IS24 598 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 NBPF5PQ86XG9 351 aaPredicted RBP8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 MNS1Q8NEH6 495 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 SPATA20Q8TB22 786 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 UBXN4Q92575 508 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 DPF3Q92784 378 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 PANX2Q96RD6 677 aa8.27□□□□□ -1.09
MTHFD1-215ENST00000557370 NBPF3Q9H094 633 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms