RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 PIK3R5Q8WYR1 880 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 COL26A1Q96A83 441 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 CDCA5Q96FF9 252 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 STIM2Q9P246 746 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 PDE4DIPQ5VU43 2346 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 UBR2Q8IWV8 1755 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 C1QTNF9BB2RNN3 333 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 FKTNO75072 461 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 XYLBO75191 536 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
ATXN3-247ENST00000557311 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-247ENST00000557311 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 ETFBKMTQ8IXQ9 262 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 GPR152Q8TDT2 470 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 EYA3Q99504 573 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 GSX2Q9BZM3 304 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
ATXN3-247ENST00000557311 DMGDHQ9UI17 866 aaKnown RBP6.34□□□□□ -1.39
ATXN3-247ENST00000557311 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ECE2O60344 883 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ITGB7P26010 798 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 TARSP26639 723 aaKnown RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ZAP70P43403 619 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ANGEL2Q5VTE6 544 aaKnown RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 CD163Q86VB7 1156 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 Q8N3U1 123 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 GTF3C2Q8WUA4 911 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ARFGEF2Q9Y6D5 1785 aa6.33□□□□□ -1.4
ATXN3-247ENST00000557311 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 OPLAHO14841 1288 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 NEFMP07197 916 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 PCSK2P16519 638 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 CHRNA4P43681 627 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 INHBEP58166 350 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 GPSM2P81274 684 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 SREBF2Q12772 1141 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 ALYREFQ86V81 257 aaKnown RBP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 RETREG2Q8NC44 543 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 ANO2Q9NQ90 1003 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 DNAJB12Q9NXW2 375 aaKnown RBP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 USTQ9Y2C2 406 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 FNDC3AQ9Y2H6 1198 aaKnown RBP6.32□□□□□ -1.4
ATXN3-247ENST00000557311 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
ATXN3-247ENST00000557311 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-247ENST00000557311 M0R082 166 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 TNFRSF10BO14763 440 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 CPB1P15086 417 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
ATXN3-247ENST00000557311 DGKGP49619 791 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 RPS8P62241 208 aaKnown RBP6.31□□□□□ -1.4
ATXN3-247ENST00000557311 MTMR3Q13615 1198 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 ZNF417Q8TAU3 575 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 NUDT8Q8WV74 236 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 CELF1Q92879 486 aaKnown RBP6.31□□□□□ -1.4
ATXN3-247ENST00000557311 ZNF587Q96SQ5 575 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-247ENST00000557311 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
ATXN3-247ENST00000557311 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 GNB5O14775 395 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 PSAPP07602 524 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 NF2P35240 595 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 DNM1Q05193 864 aaKnown RBP6.3□□□□□ -1.4
ATXN3-247ENST00000557311 TRIM26Q12899 539 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-247ENST00000557311 AIMP1Q12904 312 aaKnown RBP6.3□□□□□ -1.4
ATXN3-247ENST00000557311 PCSK7Q16549 785 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 C8orf34Q49A92 452 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 HFE2Q6ZVN8 426 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 DHX32Q7L7V1 743 aaKnown RBP6.3□□□□□ -1.4
ATXN3-247ENST00000557311 ARMC9Q7Z3E5 817 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 ATCAYQ86WG3 371 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 MICALL1Q8N3F8 863 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 HELQQ8TDG4 1101 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 TNFRSF25Q93038 417 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 GMLQ99445 158 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms