RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 CRHR2Q13324 411 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 NFE2L2Q16236 605 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 MAP3K11Q16584 847 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 FAM26DQ5JW98 314 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 DACT2Q5SW24 774 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 NBPF11Q86T75 865 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 NLRP8Q86W28 1048 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 NPAS4Q8IUM7 802 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 APOBEC3FQ8IUX4 373 aaKnown RBP8.76□□□□□ -1.01
LINC00640-204ENST00000557295 PLBD2Q8NHP8 589 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 TSPYL4Q9UJ04 414 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 MYO3BQ8WXR4 1341 aa8.76□□□□□ -1.01
LINC00640-204ENST00000557295 A0A0C4DFX4 3053 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 SOBPA7XYQ1 873 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
LINC00640-204ENST00000557295 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 CAP1Q01518 475 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 SP3Q02447 781 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 PTSQ03393 145 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 COL19A1Q14993 1142 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 ARHGEF6Q15052 776 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 WNK4Q96J92 1243 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 PLEKHF1Q96S99 279 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 CRISPLD1Q9H336 500 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 PRO3102Q9H379 93 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 ANGEL1Q9UNK9 670 aaKnown RBP8.75□□□□□ -1.01
LINC00640-204ENST00000557295 XDHP47989 1333 aa8.75□□□□□ -1.01
LINC00640-204ENST00000557295 CENPFP49454 3210 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 SASH1O94885 1247 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 HSP90B1P14625 803 aaKnown RBP8.74□□□□□ -1.01
LINC00640-204ENST00000557295 PRKG1Q13976 671 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 SLC4A8Q2Y0W8 1093 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 SLC9C1Q4G0N8 1177 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 STRIP1Q5VSL9 837 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 ZNF438Q7Z4V0 828 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 ZBED3Q96IU2 234 aaPredicted RBP8.74□□□□□ -1.01
LINC00640-204ENST00000557295 CLMNQ96JQ2 1002 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 NUCKS1Q9H1E3 243 aaKnown RBP8.74□□□□□ -1.01
LINC00640-204ENST00000557295 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 SEC31BQ9NQW1 1179 aa8.74□□□□□ -1.01
LINC00640-204ENST00000557295 NUP98P52948 1817 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 COL4A1P02462 1669 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 COL1A1P02452 1464 aaPredicted RBP8.73□□□□□ -1.01
LINC00640-204ENST00000557295 OPLAHO14841 1288 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 TREHO43280 583 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 ZNF16P17020 682 aaPredicted RBP8.73□□□□□ -1.01
LINC00640-204ENST00000557295 LBRQ14739 615 aaKnown RBP8.73□□□□□ -1.01
LINC00640-204ENST00000557295 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 FOXR1Q6PIV2 292 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 GJD3Q8N144 294 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 ZBTB38Q8NAP3 1195 aaPredicted RBP8.73□□□□□ -1.01
LINC00640-204ENST00000557295 PTPN18Q99952 460 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 MXD3Q9BW11 206 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 DEFB129Q9H1M3 183 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 NXF1Q9UBU9 619 aaKnown RBP8.73□□□□□ -1.01
LINC00640-204ENST00000557295 USP20Q9Y2K6 914 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 PPP2R3BQ9Y5P8 575 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 PTCH2Q9Y6C5 1203 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
LINC00640-204ENST00000557295 AKAP11Q9UKA4 1901 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 ANKRD36CQ5JPF3 1778 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 KDM3BQ7LBC6 1761 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 A0A1W2PPC1 479 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 KHNYNO15037 678 aaKnown RBP8.72□□□□□ -1.01
LINC00640-204ENST00000557295 ATXN7O15265 892 aaPredicted RBP8.72□□□□□ -1.01
LINC00640-204ENST00000557295 WIPF1O43516 503 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 LDHBP07195 334 aaKnown RBP8.72□□□□□ -1.01
LINC00640-204ENST00000557295 P4HBP07237 508 aaKnown RBP8.72□□□□□ -1.01
LINC00640-204ENST00000557295 INPP5BP32019 993 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 CCDC152Q4G0S7 254 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 PNMA5Q96PV4 448 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 CHPF2Q9P2E5 772 aa8.72□□□□□ -1.01
LINC00640-204ENST00000557295 XYLBO75191 536 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 SUPT20HL1Q3ZLR7 823 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 UBE2Q1Q7Z7E8 422 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 CCDC155Q8N6L0 562 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 ZCCHC2Q9C0B9 1178 aaKnown RBP8.71□□□□□ -1.02
LINC00640-204ENST00000557295 COA1Q9GZY4 146 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 PNNQ9H307 717 aaKnown RBP8.71□□□□□ -1.02
LINC00640-204ENST00000557295 DMGDHQ9UI17 866 aaKnown RBP8.71□□□□□ -1.02
LINC00640-204ENST00000557295 FZD1Q9UP38 647 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 PCDHGC4Q9Y5F7 938 aa8.71□□□□□ -1.02
LINC00640-204ENST00000557295 SSC5DA1L4H1 1573 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 CUL9Q8IWT3 2517 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 WTIPA6NIX2 430 aaPredicted RBP8.7□□□□□ -1.02
LINC00640-204ENST00000557295 GPR182O15218 404 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 IREB2P48200 963 aaKnown RBP8.7□□□□□ -1.02
LINC00640-204ENST00000557295 TYRO3Q06418 890 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 TTC39BQ5VTQ0 682 aaPredicted RBP8.7□□□□□ -1.02
LINC00640-204ENST00000557295 ANKRD18AQ8IVF6 992 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 DPF3Q92784 378 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 SHISA4Q96DD7 197 aa8.7□□□□□ -1.02
LINC00640-204ENST00000557295 MRRFQ96E11 262 aaKnown RBP8.7□□□□□ -1.02
LINC00640-204ENST00000557295 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
LINC00640-204ENST00000557295 DDX60Q8IY21 1712 aaKnown RBP8.7□□□□□ -1.02
LINC00640-204ENST00000557295 RBBP6Q7Z6E9 1792 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms