RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 LIG4P49917 911 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 SETDB1Q15047 1291 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 APOBEC3FQ8IUX4 373 aaKnown RBP13.24□□□□□ -0.29
NEK9-210ENST00000557026 SLC8A2Q9UPR5 921 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 ZBTB16Q05516 673 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 PSMD1Q99460 953 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 CHMP2AO43633 222 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 SEPT2Q15019 361 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 P3H4Q92791 437 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 MRPL44Q9H9J2 332 aaKnown RBP13.23□□□□□ -0.29
NEK9-210ENST00000557026 SLC12A6Q9UHW9 1150 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 USH1CQ9Y6N9 552 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 DYNC1I1O14576 645 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 PDE8BO95263 885 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 ALAS1P13196 640 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 LTKP29376 864 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 MMP14P50281 582 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 ARID5AQ03989 594 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
NEK9-210ENST00000557026 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 NEK8Q86SG6 692 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 HARSP12081 509 aaKnown RBP13.23□□□□□ -0.29
NEK9-210ENST00000557026 ZNF569Q5MCW4 686 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 MXRA7P84157 204 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 CDC37Q16543 378 aaPredicted RBP13.23□□□□□ -0.29
NEK9-210ENST00000557026 BBOF1Q8ND07 529 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
NEK9-210ENST00000557026 THAP12O43422 761 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 IGHDP01880 384 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 CD19P15391 556 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 KRT9P35527 623 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 GRK7Q8WTQ7 553 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 C1orf112Q9NSG2 853 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 CCND2P30279 289 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 ZAP70P43403 619 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 CHRNDQ07001 517 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 GRAPQ13588 217 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
NEK9-210ENST00000557026 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
NEK9-210ENST00000557026 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 TTLL1O95922 423 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 ZSCAN20P17040 1043 aaPredicted RBP13.22□□□□□ -0.29
NEK9-210ENST00000557026 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 TTC1Q99614 292 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 PI4KBQ9UBF8 816 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 JCADQ9P266 1359 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 USP17L3A6NCW0 530 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 USP17L4A6NCW7 530 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
NEK9-210ENST00000557026 MTMR3Q13615 1198 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 USP17L1Q7RTZ2 530 aa13.22□□□□□ -0.29
NEK9-210ENST00000557026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.22□□□□□ -0.29
NEK9-210ENST00000557026 SYNRGQ9UMZ2 1314 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 GJC1P36383 396 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
NEK9-210ENST00000557026 TCP10Q12799 353 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.29
NEK9-210ENST00000557026 SYNMO15061 1565 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 GCNT3O95395 438 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 PDE6AP16499 860 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 MAP7D3Q8IWC1 876 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 A2ML1A8K2U0 1454 aa13.21□□□□□ -0.29
NEK9-210ENST00000557026 SLC12A2P55011 1212 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 PLA2G4DQ86XP0 818 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 PNMA1Q8ND90 353 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 USP6P35125 1406 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 FYB2Q5VWT5 728 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 GIMAP7Q8NHV1 300 aa13.21□□□□□ -0.3
NEK9-210ENST00000557026 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 TMEM191BP0C7N4 346 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 TNNI1P19237 187 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
NEK9-210ENST00000557026 KRT40Q6A162 431 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 MYOCDQ8IZQ8 938 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 STK17AQ9UEE5 414 aa13.2□□□□□ -0.3
NEK9-210ENST00000557026 SUGT1Q9Y2Z0 365 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms