RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.12
VIPAS39-209ENST00000556909 ARRDC4Q8NCT1 418 aa22.02■■□□□ 1.12
VIPAS39-209ENST00000556909 MAML3Q96JK9 1138 aa22.02■■□□□ 1.12
VIPAS39-209ENST00000556909 STXBP5LQ9Y2K9 1186 aa22.02■■□□□ 1.12
VIPAS39-209ENST00000556909 SLC4A4Q9Y6R1 1079 aa22.02■■□□□ 1.12
VIPAS39-209ENST00000556909 MYH4Q9Y623 1939 aa22.02■■□□□ 1.11
VIPAS39-209ENST00000556909 KBTBD13C9JR72 458 aa22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 DLL1O00548 723 aa22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 EEF2P13639 858 aaKnown RBP22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 PRAMEF19Q5SWL8 479 aa22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 DDRGK1Q96HY6 314 aa22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 FBXO28Q9NVF7 368 aa22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 ADAMTS5Q9UNA0 930 aa22.01■■□□□ 1.11
VIPAS39-209ENST00000556909 UNC80Q8N2C7 3258 aa22■■□□□ 1.11
VIPAS39-209ENST00000556909 FCER1AP12319 257 aa22■■□□□ 1.11
VIPAS39-209ENST00000556909 CTR9Q6PD62 1173 aa22■■□□□ 1.11
VIPAS39-209ENST00000556909 PUS7LQ9H0K6 701 aaKnown RBP22■■□□□ 1.11
VIPAS39-209ENST00000556909 CHMP4BQ9H444 224 aaKnown RBP22■■□□□ 1.11
VIPAS39-209ENST00000556909 PRKAG2Q9UGJ0 569 aa22■■□□□ 1.11
VIPAS39-209ENST00000556909 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
VIPAS39-209ENST00000556909 SLC25A27O95847 323 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 SNX17Q15036 470 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 FAM47AQ5JRC9 791 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 ZSCAN25Q6NSZ9 544 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 SLC39A5Q6ZMH5 540 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 LRRCC1Q9C099 1032 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 KANSL2Q9H9L4 492 aa21.99■■□□□ 1.11
VIPAS39-209ENST00000556909 MYCNP04198 464 aaPredicted RBP21.98■■□□□ 1.11
VIPAS39-209ENST00000556909 MMP19Q99542 508 aa21.98■■□□□ 1.11
VIPAS39-209ENST00000556909 GOPCQ9HD26 462 aa21.98■■□□□ 1.11
VIPAS39-209ENST00000556909 ARPP21Q9UBL0 812 aaPredicted RBP21.98■■□□□ 1.11
VIPAS39-209ENST00000556909 SMARCA5O60264 1052 aaPredicted RBP21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 LRRC41Q15345 812 aa21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 TRIM60Q495X7 471 aa21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 RIOX2Q8IUF8 465 aa21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 ZNF214Q9UL59 606 aaPredicted RBP21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 PPP1R9AQ9ULJ8 1098 aa21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 ROBO3Q96MS0 1386 aa21.97■■□□□ 1.11
VIPAS39-209ENST00000556909 VWA5AO00534 786 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 PGK2P07205 417 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 ADCYAP1R1P41586 468 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 FAM83BQ5T0W9 1011 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 REPS2Q8NFH8 660 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 PRDM5Q9NQX1 630 aaPredicted RBP21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 NRBP1Q9UHY1 535 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 RCAN3Q9UKA8 241 aa21.96■■□□□ 1.11
VIPAS39-209ENST00000556909 POTEB2H3BUK9 544 aa21.95■■□□□ 1.1
VIPAS39-209ENST00000556909 RAD21O60216 631 aa21.95■■□□□ 1.1
VIPAS39-209ENST00000556909 FERMT2Q96AC1 680 aa21.95■■□□□ 1.1
VIPAS39-209ENST00000556909 STRBPQ96SI9 672 aaKnown RBP21.95■■□□□ 1.1
VIPAS39-209ENST00000556909 PDLIM7Q9NR12 457 aa21.95■■□□□ 1.1
VIPAS39-209ENST00000556909 MCM3APO60318 1980 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 STAT3P40763 770 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 KCTD2Q14681 263 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 ZNF792Q3KQV3 632 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 SBK1Q52WX2 424 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 C20orf194Q5TEA3 1177 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 FAM109BQ6ICB4 259 aaPredicted RBP21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 TINF2Q9BSI4 451 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 XPNPEP3Q9NQH7 507 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 ECHDC1Q9NTX5 307 aa21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 DIS3Q9Y2L1 958 aaKnown RBP21.94■■□□□ 1.1
VIPAS39-209ENST00000556909 RARBP10826 455 aa21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 RASA1P20936 1047 aa21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 COPB2P35606 906 aa21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 C1orf53Q5VUE5 145 aa21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 GUCD1Q96NT3 240 aa21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 NUP88Q99567 741 aaPredicted RBP21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 PHF24Q9UPV7 400 aa21.93■■□□□ 1.1
VIPAS39-209ENST00000556909 CDH23Q9H251 3354 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 GSG1L2A8MUP6 293 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 TAL1P17542 331 aaPredicted RBP21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 STK11IPQ8N1F8 1099 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 KBTBD3Q8NAB2 608 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 BADQ92934 168 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 SLF1Q9BQI6 1058 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 EYSQ5T1H1 3165 aa21.92■■□□□ 1.1
VIPAS39-209ENST00000556909 ZNF865P0CJ78 1059 aaPredicted RBP21.91■■□□□ 1.1
VIPAS39-209ENST00000556909 SHHQ15465 462 aa21.91■■□□□ 1.1
VIPAS39-209ENST00000556909 C9orf50Q5SZB4 431 aa21.91■■□□□ 1.1
VIPAS39-209ENST00000556909 GIMAP6Q6P9H5 292 aa21.91■■□□□ 1.1
VIPAS39-209ENST00000556909 SH3RF1Q7Z6J0 888 aa21.91■■□□□ 1.1
VIPAS39-209ENST00000556909 OSBP2Q969R2 916 aa21.91■■□□□ 1.1
VIPAS39-209ENST00000556909 TRIM43BA6NCK2 446 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 MINDY4BA8MYZ0 360 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 NDUFB10O96000 172 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 PGK1P00558 417 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 TLE2Q04725 743 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 TSHZ3Q63HK5 1081 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 RNF180Q86T96 592 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 APPBP2Q92624 585 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 TRIM43Q96BQ3 446 aaPredicted RBP21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 LENG1Q96BZ8 264 aaPredicted RBP21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 FAM161BQ96MY7 647 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 TEX13BQ9BXU2 312 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 MKNK2Q9HBH9 465 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 EPB41L4AQ9HCS5 686 aaPredicted RBP21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 NYAP2Q9P242 653 aa21.9■■□□□ 1.1
VIPAS39-209ENST00000556909 F5H6K3 240 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms