RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
SLIRP-207ENST00000556831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
SLIRP-207ENST00000556831 CTDP1Q9Y5B0 961 aaPredicted RBP16.66■□□□□ 0.26
SLIRP-207ENST00000556831 MYH4Q9Y623 1939 aa16.66■□□□□ 0.26
SLIRP-207ENST00000556831 SPDYE16A6NNV3 312 aaPredicted RBP16.65■□□□□ 0.26
SLIRP-207ENST00000556831 MTFR1Q15390 333 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 LRRC47Q8N1G4 583 aaKnown RBP16.65■□□□□ 0.26
SLIRP-207ENST00000556831 MB21D1Q8N884 522 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 ESR2Q92731 530 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 ZNF333Q96JL9 665 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 PORCNQ9H237 461 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 IVNS1ABPQ9Y6Y0 642 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 A0A0G2JMZ2 1700 aa16.65■□□□□ 0.26
SLIRP-207ENST00000556831 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
SLIRP-207ENST00000556831 F5H6K3 240 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 ELNP15502 786 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 CHMLP26374 656 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 GRK4P32298 578 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 NT5C2P49902 561 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 UBXN2AP68543 259 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 KLRC3Q07444 240 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 PLS1Q14651 629 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 SLAIN1Q8ND83 568 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 SOCS4Q8WXH5 440 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 TMEM106CQ9BVX2 250 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 BTBD7Q9P203 1132 aa16.64■□□□□ 0.25
SLIRP-207ENST00000556831 RBBP6Q7Z6E9 1792 aaKnown RBP16.64■□□□□ 0.25
SLIRP-207ENST00000556831 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
SLIRP-207ENST00000556831 FLT3LGP49771 235 aa16.63■□□□□ 0.25
SLIRP-207ENST00000556831 IKQ13123 557 aaPredicted RBP16.63■□□□□ 0.25
SLIRP-207ENST00000556831 NBPF3Q9H094 633 aa16.63■□□□□ 0.25
SLIRP-207ENST00000556831 COL11A1P12107 1806 aaPredicted RBP16.62■□□□□ 0.25
SLIRP-207ENST00000556831 NDUFB10O96000 172 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 DSG3P32926 999 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
SLIRP-207ENST00000556831 NUDT12Q9BQG2 462 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 FBXO28Q9NVF7 368 aa16.62■□□□□ 0.25
SLIRP-207ENST00000556831 ADCY3O60266 1144 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 NMT2O60551 498 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 EN2P19622 333 aaPredicted RBP16.61■□□□□ 0.25
SLIRP-207ENST00000556831 TRIM32Q13049 653 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 TRDNQ13061 729 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 IRF5Q13568 498 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 GPR142Q7Z601 462 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 IQCA1Q86XH1 822 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 MKL1Q969V6 931 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 ATG4CQ96DT6 458 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 KRT23Q9C075 422 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
SLIRP-207ENST00000556831 CEP290O15078 2479 aa16.61■□□□□ 0.25
SLIRP-207ENST00000556831 SGSM2O43147 1006 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 FGRP09769 529 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 BMP3P12645 472 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 RGS2P41220 211 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 SLC1A4P43007 532 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 TBC1D10CQ8IV04 446 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 SPATC1LQ9H0A9 340 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 FEM1BQ9UK73 627 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 PPP1R9AQ9ULJ8 1098 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
SLIRP-207ENST00000556831 ZBED4O75132 1171 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 COPB2P35606 906 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 CCDC96Q2M329 555 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 TRMT44Q8IYL2 757 aaKnown RBP16.59■□□□□ 0.25
SLIRP-207ENST00000556831 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
SLIRP-207ENST00000556831 PXYLP1Q8TE99 480 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 PPP4R2Q9NY27 417 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 NEDD4P46934 1319 aa16.59■□□□□ 0.25
SLIRP-207ENST00000556831 KDM4AO75164 1064 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 SLC25A27O95847 323 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
SLIRP-207ENST00000556831 STAT2P52630 851 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.24
SLIRP-207ENST00000556831 CHURC1Q8WUH1 139 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 GMCL1Q96IK5 515 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 COL25A1Q9BXS0 654 aaPredicted RBP16.58■□□□□ 0.24
SLIRP-207ENST00000556831 MROH8Q9H579 483 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
SLIRP-207ENST00000556831 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms