RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 TMEM131LA2VDJ0 1609 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 SPATA31A6Q5VVP1 1343 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 PITPNM2Q9BZ72 1349 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 E9PCH4 1651 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 ENC1O14682 589 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 ATP2B2Q01814 1243 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 NKPD1Q17RQ9 610 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 CDKAL1Q5VV42 579 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 CYFIP1Q7L576 1253 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 UBE3DQ7Z6J8 389 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 C3orf58Q8NDZ4 430 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 ZNF507Q8TCN5 953 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 DDX17Q92841 729 aaKnown RBP5.68□□□□□ -1.5
ATXN3-240ENST00000556339 LIN37Q96GY3 246 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-240ENST00000556339 KIRREL1Q96J84 757 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 TOX2Q96NM4 488 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 PPP1R16BQ96T49 567 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 CARS2Q9HA77 564 aaKnown RBP5.68□□□□□ -1.5
ATXN3-240ENST00000556339 CTNND2Q9UQB3 1225 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 RPGRIP1LQ68CZ1 1315 aa5.68□□□□□ -1.5
ATXN3-240ENST00000556339 ADAMTS13Q76LX8 1427 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 PAGE1O75459 146 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 LRIG2O94898 1065 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 LMNB1P20700 586 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 BMP6P22004 513 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 ETF1P62495 437 aaKnown RBP5.67□□□□□ -1.5
ATXN3-240ENST00000556339 FBLN7Q53RD9 439 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 TMEM67Q5HYA8 995 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 SFRP5Q5T4F7 317 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 MFSD4AQ8N468 514 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 BHLHE22Q8NFJ8 381 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-240ENST00000556339 MIPEPQ99797 713 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-240ENST00000556339 TRPM2O94759 1503 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 UNC13BO14795 1591 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 KIF1BO60333 1816 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 METP08581 1390 aa5.67□□□□□ -1.5
ATXN3-240ENST00000556339 IQGAP3Q86VI3 1631 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-240ENST00000556339 ZNF503-AS2A6NEH8 195 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 H3BS24 57 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 TREHO43280 583 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 EOMESO95936 686 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 GLI1P08151 1106 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 NTF4P34130 210 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 PCNX4Q63HM2 1172 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 FAM214BQ7L5A3 538 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 HDXQ7Z353 690 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 ZSCAN29Q8IWY8 852 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-240ENST00000556339 ZSCAN18Q8TBC5 510 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-240ENST00000556339 FBF1Q8TES7 1133 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 HSPA12BQ96MM6 686 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 ORAI2Q96SN7 254 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 MPHOSPH9Q99550 1183 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 ATP13A1Q9HD20 1204 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 LMCD1Q9NZU5 365 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 CYP8B1Q9UNU6 501 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 AFF2P51816 1311 aa5.66□□□□□ -1.5
ATXN3-240ENST00000556339 PTPRUQ92729 1446 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 NWD1Q149M9 1564 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 FGD1P98174 961 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 MESP2Q0VG99 397 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 FYB2Q5VWT5 728 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 ALG1LQ6GMV1 187 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-240ENST00000556339 SYDE1Q6ZW31 735 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-240ENST00000556339 NPAS4Q8IUM7 802 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 CCDC120Q96HB5 630 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 CACNA2D2Q9NY47 1150 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
ATXN3-240ENST00000556339 SPHKAPQ2M3C7 1700 aa5.65□□□□□ -1.51
ATXN3-240ENST00000556339 DIP2AQ14689 1571 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 NFIBO00712 420 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 GIPC1O14908 333 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 TSPAN15O95858 294 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 CELA3AP09093 270 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 RBM6P78332 1123 aaKnown RBP5.64□□□□□ -1.51
ATXN3-240ENST00000556339 XPCQ01831 940 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-240ENST00000556339 RING1Q06587 406 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 DSC3Q14574 896 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 SCARA3Q6AZY7 606 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 TMEM132EQ6IEE7 984 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 PRR23BQ6ZRT6 265 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 WAPLQ7Z5K2 1190 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 XAGE3Q8WTP9 111 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 PLPPR2Q96GM1 343 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 DIRC2Q96SL1 478 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
ATXN3-240ENST00000556339 NAIPQ13075 1403 aa5.64□□□□□ -1.51
ATXN3-240ENST00000556339 PRR33A8MZF0 331 aa5.63□□□□□ -1.51
ATXN3-240ENST00000556339 SLITRK5O94991 958 aa5.63□□□□□ -1.51
ATXN3-240ENST00000556339 CBX7O95931 251 aa5.63□□□□□ -1.51
ATXN3-240ENST00000556339 RAC2P15153 192 aa5.63□□□□□ -1.51
ATXN3-240ENST00000556339 CYP7A1P22680 504 aa5.63□□□□□ -1.51
ATXN3-240ENST00000556339 SAFB2Q14151 953 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-240ENST00000556339 INPP5AQ14642 412 aa5.63□□□□□ -1.51
ATXN3-240ENST00000556339 WIPI1Q5MNZ9 446 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms