RNA–Protein interactions for RNA: ENST00000556040.1

ZFYVE1-207, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 2

Gene ZFYVE1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-207ENST00000556040 CLIP2Q9UDT6 1046 aa17.09■□□□□ 0.33
ZFYVE1-207ENST00000556040 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
ZFYVE1-207ENST00000556040 CEP290O15078 2479 aa17.09■□□□□ 0.33
ZFYVE1-207ENST00000556040 ZNFX1Q9P2E3 1918 aaKnown RBP17.08■□□□□ 0.33
ZFYVE1-207ENST00000556040 STRNO43815 780 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 ADORA2AP29274 412 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 MFSD14CQ5VZR4 134 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 DPP9Q86TI2 863 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 CHD1LQ86WJ1 897 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 RILPL2Q969X0 211 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 NUP88Q99567 741 aaPredicted RBP17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 MROH8Q9H579 483 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
ZFYVE1-207ENST00000556040 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 IGKV6D-41A0A0C4DH26 115 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 F5H6K3 240 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 H0YGN5 161 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 NDUFB10O96000 172 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 HOXC6P09630 235 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 CCND3P30281 292 aaPredicted RBP17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 NUCB1Q02818 461 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 KLRC3Q07444 240 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 TMEM132BQ14DG7 1078 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 FAM47AQ5JRC9 791 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 NECAB2Q7Z6G3 386 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 NPLOC4Q8TAT6 608 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 FAM227BQ96M60 508 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 MTMR4Q9NYA4 1195 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 FLRT1Q9NZU1 646 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 ALPK3Q96L96 1907 aa17.07■□□□□ 0.32
ZFYVE1-207ENST00000556040 PLXNA1Q9UIW2 1896 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 VWA5AO00534 786 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 FOXP2O15409 715 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 SLC25A27O95847 323 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 TTLL1O95922 423 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 TFAP4Q01664 338 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 VPS53Q5VIR6 699 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 LRRC47Q8N1G4 583 aaKnown RBP17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 SLC5A4Q9NY91 659 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
ZFYVE1-207ENST00000556040 FCER1AP12319 257 aa17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 NMIQ13287 307 aaPredicted RBP17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 TICAM2Q86XR7 235 aa17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 OGDHLQ9ULD0 1010 aa17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 SYNPO2Q9UMS6 1093 aa17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 NR2E3Q9Y5X4 410 aa17.05■□□□□ 0.32
ZFYVE1-207ENST00000556040 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 EVI5O60447 810 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 CNGA1P29973 690 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 CYP2C19P33261 490 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 STAT3P40763 770 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 ABRAQ8N0Z2 381 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 MKL1Q969V6 931 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 NBPF3Q9H094 633 aa17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 ISY1Q9ULR0 285 aaKnown RBP17.04■□□□□ 0.32
ZFYVE1-207ENST00000556040 COBLO75128 1261 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 SLC34A2O95436 690 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 COPB2P35606 906 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 HABP4Q5JVS0 413 aaKnown RBP17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 RIOX2Q8IUF8 465 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 GMCL1P1Q8NEA9 526 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 MMP19Q99542 508 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 C11orf49Q9H6J7 331 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 ZNF214Q9UL59 606 aaPredicted RBP17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
ZFYVE1-207ENST00000556040 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 ALX1Q15699 326 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 OLFML2BQ68BL8 750 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 SLFN13Q68D06 897 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 LHX8Q68G74 356 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 REPS2Q8NFH8 660 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 KIFC2Q96AC6 838 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 TEX13BQ9BXU2 312 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 INCENPQ9NQS7 918 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 STX8Q9UNK0 236 aa17.02■□□□□ 0.32
ZFYVE1-207ENST00000556040 MSCO60682 206 aa17.01■□□□□ 0.31
ZFYVE1-207ENST00000556040 ZBED4O75132 1171 aa17.01■□□□□ 0.31
ZFYVE1-207ENST00000556040 FGAP02671 866 aa17.01■□□□□ 0.31
ZFYVE1-207ENST00000556040 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
ZFYVE1-207ENST00000556040 BMP3P12645 472 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms