RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 GUCD1Q96NT3 240 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.36
CHMP4BP1-201ENST00000556017 CTR9Q6PD62 1173 aa17.33■□□□□ 0.36
CHMP4BP1-201ENST00000556017 MROH8Q9H579 483 aa17.33■□□□□ 0.36
CHMP4BP1-201ENST00000556017 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 LRRC41Q15345 812 aa17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 FAM47AQ5JRC9 791 aa17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 CCDC17Q96LX7 622 aa17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ZNF214Q9UL59 606 aaPredicted RBP17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
CHMP4BP1-201ENST00000556017 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 PLS1Q14651 629 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 FAM109BQ6ICB4 259 aaPredicted RBP17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SH3RF1Q7Z6J0 888 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 NCAPG2Q86XI2 1143 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 MCM3APO60318 1980 aa17.31■□□□□ 0.36
CHMP4BP1-201ENST00000556017 TRIM43BA6NCK2 446 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 HMMRO75330 724 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 PGK2P07205 417 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 TAL1P17542 331 aaPredicted RBP17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ITGB8P26012 769 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ADCYAP1R1P41586 468 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ZNF792Q3KQV3 632 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 TRIM60Q495X7 471 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 C9orf50Q5SZB4 431 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 C1orf53Q5VUE5 145 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 RIOX2Q8IUF8 465 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ARRDC4Q8NCT1 418 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 TRIM43Q96BQ3 446 aaPredicted RBP17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 PDLIM7Q9NR12 457 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ATP11BQ9Y2G3 1177 aa17.3■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ROBO3Q96MS0 1386 aa17.29■□□□□ 0.36
CHMP4BP1-201ENST00000556017 VWA5AO00534 786 aa17.29■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SHHQ15465 462 aa17.29■□□□□ 0.36
CHMP4BP1-201ENST00000556017 STRBPQ96SI9 672 aaKnown RBP17.29■□□□□ 0.36
CHMP4BP1-201ENST00000556017 PPP1R9AQ9ULJ8 1098 aa17.29■□□□□ 0.36
CHMP4BP1-201ENST00000556017 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 ZNF865P0CJ78 1059 aaPredicted RBP17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 MS4A1P11836 297 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 FCER1AP12319 257 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 RASA1P20936 1047 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 FAM83BQ5T0W9 1011 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 FERMT2Q96AC1 680 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SH2D4AQ9H788 454 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 KANSL2Q9H9L4 492 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 PHF24Q9UPV7 400 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
CHMP4BP1-201ENST00000556017 KBTBD13C9JR72 458 aa17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SLC25A27O95847 323 aa17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SBK1Q52WX2 424 aa17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 BADQ92934 168 aa17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 OSBP2Q969R2 916 aa17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 LBHD1Q9BQE6 289 aaPredicted RBP17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 TINF2Q9BSI4 451 aa17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
CHMP4BP1-201ENST00000556017 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 STAT3P40763 770 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 EPHB4P54760 987 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 TLE2Q04725 743 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 MMP19Q99542 508 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 DIS3Q9Y2L1 958 aaKnown RBP17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 RIPK3Q9Y572 518 aa17.26■□□□□ 0.35
CHMP4BP1-201ENST00000556017 DNAJC25-GNG10A0A024R161 153 aa17.25■□□□□ 0.35
CHMP4BP1-201ENST00000556017 PGK1P00558 417 aa17.25■□□□□ 0.35
CHMP4BP1-201ENST00000556017 FGD4Q96M96 766 aa17.25■□□□□ 0.35
CHMP4BP1-201ENST00000556017 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
CHMP4BP1-201ENST00000556017 XPNPEP3Q9NQH7 507 aa17.25■□□□□ 0.35
CHMP4BP1-201ENST00000556017 SNAI1O95863 264 aaPredicted RBP17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 TSHZ3Q63HK5 1081 aa17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 CCSAPQ6IQ19 270 aaPredicted RBP17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 TTYH1Q9H313 450 aaPredicted RBP17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 PRDM5Q9NQX1 630 aaPredicted RBP17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 NYAP2Q9P242 653 aa17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 ARPP21Q9UBL0 812 aaPredicted RBP17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 CHD9Q3L8U1 2897 aa17.24■□□□□ 0.35
CHMP4BP1-201ENST00000556017 F5H6K3 240 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 ADCY6O43306 1168 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 NDUFB10O96000 172 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 KLRC3Q07444 240 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 COL25A1Q9BXS0 654 aaPredicted RBP17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms