RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 CENPFP49454 3210 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 TSPY3P0CV98 308 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 TSPY8P0CW00 308 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 ZMYM1Q5SVZ6 1142 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 EVI5LQ96CN4 794 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 MMP19Q99542 508 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX6-205ENST00000555648 FBXO28Q9NVF7 368 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 DDX20Q9UHI6 824 aaKnown RBP18.37■□□□□ 0.53
SNX6-205ENST00000555648 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
SNX6-205ENST00000555648 ROBO3Q96MS0 1386 aa18.37■□□□□ 0.53
SNX6-205ENST00000555648 F5H6K3 240 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 VWA5AO00534 786 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 STAT3P40763 770 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 KLRC3Q07444 240 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 KCTD2Q14681 263 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 TMEM132BQ14DG7 1078 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 OLFML2BQ68BL8 750 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 LHX8Q68G74 356 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
SNX6-205ENST00000555648 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
SNX6-205ENST00000555648 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
SNX6-205ENST00000555648 TTLL1O95922 423 aa18.35■□□□□ 0.53
SNX6-205ENST00000555648 NDUFB10O96000 172 aa18.35■□□□□ 0.53
SNX6-205ENST00000555648 FXR1P51114 621 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX6-205ENST00000555648 PPARAQ07869 468 aa18.35■□□□□ 0.53
SNX6-205ENST00000555648 PPP4R3BQ5MIZ7 849 aa18.35■□□□□ 0.53
SNX6-205ENST00000555648 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
SNX6-205ENST00000555648 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
SNX6-205ENST00000555648 COBLO75128 1261 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 ZBED4O75132 1171 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 SLC4A3P48751 1232 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 PDE1AP54750 535 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 CEP95Q96GE4 821 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 MTMR4Q9NYA4 1195 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 ZMYND8Q9ULU4 1186 aaPredicted RBP18.34■□□□□ 0.53
SNX6-205ENST00000555648 ADAMTS5Q9UNA0 930 aa18.34■□□□□ 0.53
SNX6-205ENST00000555648 BAZ2AQ9UIF9 1905 aaKnown RBP18.33■□□□□ 0.53
SNX6-205ENST00000555648 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
SNX6-205ENST00000555648 MNX1P50219 401 aaPredicted RBP18.33■□□□□ 0.52
SNX6-205ENST00000555648 TFAP4Q01664 338 aa18.33■□□□□ 0.52
SNX6-205ENST00000555648 PRPF38AQ8NAV1 312 aaKnown RBP18.33■□□□□ 0.52
SNX6-205ENST00000555648 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
SNX6-205ENST00000555648 TEX13BQ9BXU2 312 aa18.33■□□□□ 0.52
SNX6-205ENST00000555648 STAP2Q9UGK3 403 aa18.33■□□□□ 0.52
SNX6-205ENST00000555648 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.52
SNX6-205ENST00000555648 PLXNB2O15031 1838 aa18.33■□□□□ 0.52
SNX6-205ENST00000555648 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 TRIM6-TRIM34B2RNG4 842 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 CYBAP13498 195 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 FAM47AQ5JRC9 791 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
SNX6-205ENST00000555648 NEDD1Q8NHV4 660 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 LNPKQ9C0E8 428 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 SENP6Q9GZR1 1112 aaPredicted RBP18.32■□□□□ 0.52
SNX6-205ENST00000555648 HELLSQ9NRZ9 838 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 FEM1BQ9UK73 627 aa18.32■□□□□ 0.52
SNX6-205ENST00000555648 MYH7P12883 1935 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 PFASO15067 1338 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 SALL3Q9BXA9 1300 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 IGKV6D-41A0A0C4DH26 115 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 KBTBD13C9JR72 458 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 DNM1LO00429 736 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
SNX6-205ENST00000555648 SLFN13Q68D06 897 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 SNRNP48Q6IEG0 339 aaKnown RBP18.31■□□□□ 0.52
SNX6-205ENST00000555648 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 MKL1Q969V6 931 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 BRCA2P51587 3418 aa18.31■□□□□ 0.52
SNX6-205ENST00000555648 A0A1W2PPC1 479 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 SEPT4O43236 478 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 PGK2P07205 417 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 COL6A1P12109 1028 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 SYN1P17600 705 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 GMCL1P1Q8NEA9 526 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 TRPV1Q8NER1 839 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 RILPL2Q969X0 211 aa18.3■□□□□ 0.52
SNX6-205ENST00000555648 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
SNX6-205ENST00000555648 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
SNX6-205ENST00000555648 MKI67P46013 3256 aaKnown RBP18.29■□□□□ 0.52
SNX6-205ENST00000555648 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
SNX6-205ENST00000555648 BMP3P12645 472 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 CTDSPL2Q05D32 466 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 MCMDC2Q4G0Z9 681 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 PRAMEF19Q5SWL8 479 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 ANO1Q5XXA6 986 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 TICAM2Q86XR7 235 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 REPS2Q8NFH8 660 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
SNX6-205ENST00000555648 MYH8P13535 1937 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms