RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CHD1LQ86WJ1 897 aa29.09■■■□□ 2.25
PRKCH-216ENST00000555542 RILPL2Q969X0 211 aa29.09■■■□□ 2.25
PRKCH-216ENST00000555542 PAWRQ96IZ0 340 aaKnown RBP29.09■■■□□ 2.25
PRKCH-216ENST00000555542 MROH8Q9H579 483 aa29.09■■■□□ 2.25
PRKCH-216ENST00000555542 HELLSQ9NRZ9 838 aa29.09■■■□□ 2.25
PRKCH-216ENST00000555542 COL11A1P12107 1806 aaPredicted RBP29.08■■■□□ 2.25
PRKCH-216ENST00000555542 H0YGN5 161 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 STRNO43815 780 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 IGHDP01880 384 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 ADORA2AP29274 412 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 NECAB2Q7Z6G3 386 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 ANKLE1Q8NAG6 615 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 CEP95Q96GE4 821 aa29.08■■■□□ 2.25
PRKCH-216ENST00000555542 NUP88Q99567 741 aaPredicted RBP29.08■■■□□ 2.25
PRKCH-216ENST00000555542 F5H6K3 240 aa29.07■■■□□ 2.24
PRKCH-216ENST00000555542 CCND3P30281 292 aaPredicted RBP29.07■■■□□ 2.24
PRKCH-216ENST00000555542 KLRC3Q07444 240 aa29.07■■■□□ 2.24
PRKCH-216ENST00000555542 FLRT1Q9NZU1 646 aa29.07■■■□□ 2.24
PRKCH-216ENST00000555542 PPP1R9AQ9ULJ8 1098 aa29.07■■■□□ 2.24
PRKCH-216ENST00000555542 TTLL1O95922 423 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 NDUFB10O96000 172 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 HOXC6P09630 235 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 TMEM132BQ14DG7 1078 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 FAM47AQ5JRC9 791 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 NPLOC4Q8TAT6 608 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 DIS3LQ8TF46 1054 aaKnown RBP29.06■■■□□ 2.24
PRKCH-216ENST00000555542 SLC5A4Q9NY91 659 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 NR2E3Q9Y5X4 410 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 ZNF236Q9UL36 1845 aa29.06■■■□□ 2.24
PRKCH-216ENST00000555542 IGKV6D-41A0A0C4DH26 115 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 SLC25A27O95847 323 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 TFAP4Q01664 338 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 MCMDC2Q4G0Z9 681 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 LRRC47Q8N1G4 583 aaKnown RBP29.05■■■□□ 2.24
PRKCH-216ENST00000555542 FAM227BQ96M60 508 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 SLF1Q9BQI6 1058 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 MTMR4Q9NYA4 1195 aa29.05■■■□□ 2.24
PRKCH-216ENST00000555542 ISY1Q9ULR0 285 aaKnown RBP29.05■■■□□ 2.24
PRKCH-216ENST00000555542 VWA5AO00534 786 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 EVI5O60447 810 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 CNGA1P29973 690 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 NUCB1Q02818 461 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 CTDSPL2Q05D32 466 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 VPS53Q5VIR6 699 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 NEDD1Q8NHV4 660 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 OGDHLQ9ULD0 1010 aa29.04■■■□□ 2.24
PRKCH-216ENST00000555542 CTDP1Q9Y5B0 961 aaPredicted RBP29.04■■■□□ 2.24
PRKCH-216ENST00000555542 PLIN4Q96Q06 1357 aa29.03■■■□□ 2.24
PRKCH-216ENST00000555542 A0A0D9SFI3 127 aa29.03■■■□□ 2.24
PRKCH-216ENST00000555542 FCER1AP12319 257 aa29.03■■■□□ 2.24
PRKCH-216ENST00000555542 NBPF3Q9H094 633 aa29.03■■■□□ 2.24
PRKCH-216ENST00000555542 ADAMTS5Q9UNA0 930 aa29.03■■■□□ 2.24
PRKCH-216ENST00000555542 TSPY2A6NKD2 308 aa29.02■■■□□ 2.24
PRKCH-216ENST00000555542 FOXP2O15409 715 aa29.02■■■□□ 2.24
PRKCH-216ENST00000555542 CYP2C19P33261 490 aa29.02■■■□□ 2.24
PRKCH-216ENST00000555542 STAT3P40763 770 aa29.02■■■□□ 2.24
PRKCH-216ENST00000555542 NMIQ13287 307 aaPredicted RBP29.02■■■□□ 2.24
PRKCH-216ENST00000555542 SLC34A2O95436 690 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 PPP4R3BQ5MIZ7 849 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 TICAM2Q86XR7 235 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 RIOX2Q8IUF8 465 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 PLEKHM2Q8IWE5 1019 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 ABRAQ8N0Z2 381 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 MKL1Q969V6 931 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 MMP19Q99542 508 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 C11orf49Q9H6J7 331 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 TOMM22Q9NS69 142 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 SYNPO2Q9UMS6 1093 aa29.01■■■□□ 2.23
PRKCH-216ENST00000555542 COPB2P35606 906 aa29■■■□□ 2.23
PRKCH-216ENST00000555542 HABP4Q5JVS0 413 aaKnown RBP29■■■□□ 2.23
PRKCH-216ENST00000555542 PRPF38AQ8NAV1 312 aaKnown RBP29■■■□□ 2.23
PRKCH-216ENST00000555542 KIFC2Q96AC6 838 aa29■■■□□ 2.23
PRKCH-216ENST00000555542 RANBP6O60518 1105 aaKnown RBP28.99■■■□□ 2.23
PRKCH-216ENST00000555542 COBLO75128 1261 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 SLC4A3P48751 1232 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 KCTD2Q14681 263 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 OLFML2BQ68BL8 750 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 SLFN13Q68D06 897 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 GMCL1P1Q8NEA9 526 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 STX8Q9UNK0 236 aa28.99■■■□□ 2.23
PRKCH-216ENST00000555542 COLQQ9Y215 455 aaPredicted RBP28.99■■■□□ 2.23
PRKCH-216ENST00000555542 ZBED4O75132 1171 aa28.98■■■□□ 2.23
PRKCH-216ENST00000555542 INCENPQ9NQS7 918 aa28.98■■■□□ 2.23
PRKCH-216ENST00000555542 DDX20Q9UHI6 824 aaKnown RBP28.98■■■□□ 2.23
PRKCH-216ENST00000555542 FEM1BQ9UK73 627 aa28.98■■■□□ 2.23
PRKCH-216ENST00000555542 ZNF214Q9UL59 606 aaPredicted RBP28.98■■■□□ 2.23
PRKCH-216ENST00000555542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.98■■■□□ 2.23
PRKCH-216ENST00000555542 FRMPD3Q5JV73 1810 aa28.98■■■□□ 2.23
PRKCH-216ENST00000555542 CCDC171Q6TFL3 1326 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 ZNFX1Q9P2E3 1918 aaKnown RBP28.97■■■□□ 2.23
PRKCH-216ENST00000555542 MSCO60682 206 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 MFAP1P55081 439 aaKnown RBP28.97■■■□□ 2.23
PRKCH-216ENST00000555542 ALX1Q15699 326 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 LHX8Q68G74 356 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 SNRNP48Q6IEG0 339 aaKnown RBP28.97■■■□□ 2.23
PRKCH-216ENST00000555542 CPXCR1Q8N123 301 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 TEX13BQ9BXU2 312 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 OSBPL3Q9H4L5 887 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 ANAPC4Q9UJX5 808 aa28.97■■■□□ 2.23
PRKCH-216ENST00000555542 FGAP02671 866 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms