RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 PDGFDQ9GZP0 370 aaPredicted RBP5.55□□□□□ -1.52
CPSF2-204ENST00000555244 SOX17Q9H6I2 414 aaPredicted RBP5.55□□□□□ -1.52
CPSF2-204ENST00000555244 SRA1Q9HD15 236 aaKnown RBP5.55□□□□□ -1.52
CPSF2-204ENST00000555244 COL3A1P02461 1466 aaPredicted RBP5.55□□□□□ -1.52
CPSF2-204ENST00000555244 ZNF831Q5JPB2 1677 aa5.55□□□□□ -1.52
CPSF2-204ENST00000555244 PALLDQ8WX93 1383 aa5.55□□□□□ -1.52
CPSF2-204ENST00000555244 TOGARAM1Q9Y4F4 1720 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 PNPLA7Q6ZV29 1317 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 A0A0A0MRY4 1105 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 LINC01387J3KSC0 135 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 DIAPH1O60610 1272 aaKnown RBP5.54□□□□□ -1.52
CPSF2-204ENST00000555244 FBXO24O75426 580 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 ESRRAP11474 423 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-204ENST00000555244 LMNB1P20700 586 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 CDC25BP30305 580 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 HNRNPUQ00839 825 aaKnown RBP eCLIP5.54□□□□□ -1.52
CPSF2-204ENST00000555244 AKAP4Q5JQC9 854 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 C9orf131Q5VYM1 1079 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 DIEXFQ68CQ4 756 aaKnown RBP5.54□□□□□ -1.52
CPSF2-204ENST00000555244 SULT6B1Q6IMI4 303 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 RSRP1Q9BUV0 290 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 ATG3Q9NT62 314 aa5.54□□□□□ -1.52
CPSF2-204ENST00000555244 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-204ENST00000555244 KDM6AO15550 1401 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-204ENST00000555244 ADAMTS7Q9UKP4 1686 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 ITGB4P16144 1822 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 FSCN2O14926 492 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 RAC1P63000 192 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 C19orf57Q0VDD7 668 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 FAAP100Q0VG06 881 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 AP3B2Q13367 1082 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 ZNF423Q2M1K9 1284 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 SHISA2Q6UWI4 295 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 MPRIPQ6WCQ1 1025 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 USP48Q86UV5 1035 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 METTL16Q86W50 562 aaKnown RBP5.53□□□□□ -1.52
CPSF2-204ENST00000555244 DTWD1Q8N5C7 304 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 KLHL23Q8NBE8 558 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 SLC7A3Q8WY07 619 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 SYTL4Q96C24 671 aaPredicted RBP5.53□□□□□ -1.52
CPSF2-204ENST00000555244 NACC1Q96RE7 527 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 EMILIN2Q9BXX0 1053 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 TGIF2Q9GZN2 237 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 CCSER2Q9H7U1 834 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 TPSG1Q9NRR2 321 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 TMOD3Q9NYL9 352 aa5.53□□□□□ -1.52
CPSF2-204ENST00000555244 GOLGB1Q14789 3259 aaKnown RBP5.53□□□□□ -1.52
CPSF2-204ENST00000555244 CICQ96RK0 1608 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 MRC1P22897 1456 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 SOX1O00570 391 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ENC1O14682 589 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ZBTB7AO95365 584 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 CYP11A1P05108 521 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 NME2P22392 152 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 PPP2R1AP30153 589 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ZNF157P51786 506 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 GSTM4Q03013 218 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 LRRC14Q15048 493 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 CC2D1BQ5T0F9 858 aaKnown RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ZNF530Q6P9A1 599 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ADAMTSL4Q6UY14 1074 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ERMP1Q7Z2K6 904 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 COL23A1Q86Y22 540 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ZNF654Q8IZM8 581 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 TFCP2L1Q9NZI6 479 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 ASAP1Q9ULH1 1129 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 TAF1LQ8IZX4 1826 aa5.52□□□□□ -1.53
CPSF2-204ENST00000555244 CNTNAP4Q9C0A0 1308 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 CELA3AP09093 270 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 SELPP16109 830 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 RPS26P62854 115 aaKnown RBP5.51□□□□□ -1.53
CPSF2-204ENST00000555244 ITPK1Q13572 414 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 MAP3K11Q16584 847 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 MTHFSDQ2M296 383 aaKnown RBP5.51□□□□□ -1.53
CPSF2-204ENST00000555244 C1orf141Q5JVX7 400 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 TTBK2Q6IQ55 1244 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 TXNDC11Q6PKC3 985 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 SULF2Q8IWU5 870 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 TMEM74Q96NL1 305 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 SYT17Q9BSW7 474 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 SLC52A2Q9HAB3 445 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 CYP8B1Q9UNU6 501 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.51□□□□□ -1.53
CPSF2-204ENST00000555244 CEMIPQ8WUJ3 1361 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 C4BP0C0L5 1744 aa5.51□□□□□ -1.53
CPSF2-204ENST00000555244 C5P01031 1676 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 C9orf172C9J069 976 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 RNMTO43148 476 aaKnown RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 HTATSF1O43719 755 aaKnown RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 ELNP15502 786 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 ITGB7P26010 798 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 LIG3P49916 1009 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 GNL2Q13823 731 aaKnown RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 RSPO4Q2I0M5 234 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
CPSF2-204ENST00000555244 HP1BP3Q5SSJ5 553 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-204ENST00000555244 PCNX4Q63HM2 1172 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms