RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TDO2P48775 406 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 TMEM132BQ14DG7 1078 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 STK11IPQ8N1F8 1099 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.43■■□□□ 1.18
CPSF2-203ENST00000554290 FBXO28Q9NVF7 368 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 NYAP2Q9P242 653 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 A0A0G2JMZ2 1700 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 RLFQ13129 1914 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 LRRC26Q2I0M4 334 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 FAM83BQ5T0W9 1011 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 ARRDC4Q8NCT1 418 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 TRPV1Q8NER1 839 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 SENP6Q9GZR1 1112 aaPredicted RBP22.42■■□□□ 1.18
CPSF2-203ENST00000554290 PPP1R9AQ9ULJ8 1098 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 PCDHB15Q9Y5E8 787 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 ZNF236Q9UL36 1845 aa22.42■■□□□ 1.18
CPSF2-203ENST00000554290 ROBO3Q96MS0 1386 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 PATL2C9JE40 543 aaKnown RBP22.41■■□□□ 1.18
CPSF2-203ENST00000554290 DNM1LO00429 736 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 VWA5AO00534 786 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 COPB2P35606 906 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 STAT3P40763 770 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 MAGEA10P43363 369 aaPredicted RBP22.41■■□□□ 1.18
CPSF2-203ENST00000554290 RIOX2Q8IUF8 465 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 ZNF444Q8N0Y2 327 aaPredicted RBP22.41■■□□□ 1.18
CPSF2-203ENST00000554290 MAML3Q96JK9 1138 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 NACAP1Q9BZK3 213 aa22.41■■□□□ 1.18
CPSF2-203ENST00000554290 SEPT4O43236 478 aa22.4■■□□□ 1.18
CPSF2-203ENST00000554290 KCTD2Q14681 263 aa22.4■■□□□ 1.18
CPSF2-203ENST00000554290 MMP19Q99542 508 aa22.4■■□□□ 1.18
CPSF2-203ENST00000554290 EPB41L4AQ9HCS5 686 aaPredicted RBP22.4■■□□□ 1.18
CPSF2-203ENST00000554290 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
CPSF2-203ENST00000554290 F5H6K3 240 aa22.39■■□□□ 1.17
CPSF2-203ENST00000554290 M0R2C6 588 aa22.39■■□□□ 1.17
CPSF2-203ENST00000554290 KLRC3Q07444 240 aa22.39■■□□□ 1.17
CPSF2-203ENST00000554290 IFNL3Q8IZI9 196 aa22.39■■□□□ 1.17
CPSF2-203ENST00000554290 FSD1Q9BTV5 496 aa22.39■■□□□ 1.17
CPSF2-203ENST00000554290 UBE2OQ9C0C9 1292 aaKnown RBP22.39■■□□□ 1.17
CPSF2-203ENST00000554290 CLIP2Q9UDT6 1046 aa22.39■■□□□ 1.17
CPSF2-203ENST00000554290 KBTBD13C9JR72 458 aa22.38■■□□□ 1.17
CPSF2-203ENST00000554290 PI4K2BQ8TCG2 481 aa22.38■■□□□ 1.17
CPSF2-203ENST00000554290 SLF1Q9BQI6 1058 aa22.38■■□□□ 1.17
CPSF2-203ENST00000554290 NRBP1Q9UHY1 535 aa22.38■■□□□ 1.17
CPSF2-203ENST00000554290 ZNF214Q9UL59 606 aaPredicted RBP22.38■■□□□ 1.17
CPSF2-203ENST00000554290 RANBP2P49792 3224 aaKnown RBP22.37■■□□□ 1.17
CPSF2-203ENST00000554290 SOX1O00570 391 aaPredicted RBP22.37■■□□□ 1.17
CPSF2-203ENST00000554290 MX1P20591 662 aa22.37■■□□□ 1.17
CPSF2-203ENST00000554290 GJC2Q5T442 439 aaPredicted RBP22.37■■□□□ 1.17
CPSF2-203ENST00000554290 PRPF38AQ8NAV1 312 aaKnown RBP22.37■■□□□ 1.17
CPSF2-203ENST00000554290 NUP88Q99567 741 aaPredicted RBP22.37■■□□□ 1.17
CPSF2-203ENST00000554290 DIS3Q9Y2L1 958 aaKnown RBP22.37■■□□□ 1.17
CPSF2-203ENST00000554290 PRDM1O75626 825 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 NDUFB10O96000 172 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 SLC3A2P08195 630 aaKnown RBP22.36■■□□□ 1.17
CPSF2-203ENST00000554290 ATN1P54259 1190 aaPredicted RBP22.36■■□□□ 1.17
CPSF2-203ENST00000554290 RRP1P56182 461 aaKnown RBP22.36■■□□□ 1.17
CPSF2-203ENST00000554290 PDE4BQ07343 736 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 PRAMEF19Q5SWL8 479 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 TDHQ8IZJ6 230 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 REPS2Q8NFH8 660 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 TEX13BQ9BXU2 312 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 SYNPO2Q9UMS6 1093 aa22.36■■□□□ 1.17
CPSF2-203ENST00000554290 CTDP1Q9Y5B0 961 aaPredicted RBP22.36■■□□□ 1.17
CPSF2-203ENST00000554290 IGKV6D-41A0A0C4DH26 115 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 PGK2P07205 417 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 ZMYM1Q5SVZ6 1142 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 ANO1Q5XXA6 986 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 OTUD7AQ8TE49 926 aaPredicted RBP22.35■■□□□ 1.17
CPSF2-203ENST00000554290 MKL1Q969V6 931 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 LRCH3Q96II8 777 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 SEC62Q99442 399 aaKnown RBP22.35■■□□□ 1.17
CPSF2-203ENST00000554290 NAPBQ9H115 298 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 MTMR4Q9NYA4 1195 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 PRKAG2Q9UGJ0 569 aa22.35■■□□□ 1.17
CPSF2-203ENST00000554290 ZBED4O75132 1171 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 TTLL1O95922 423 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 MYCNP04198 464 aaPredicted RBP22.34■■□□□ 1.17
CPSF2-203ENST00000554290 ZNF792Q3KQV3 632 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 LRIT3Q3SXY7 679 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 SNRNP48Q6IEG0 339 aaKnown RBP22.34■■□□□ 1.17
CPSF2-203ENST00000554290 CEP95Q96GE4 821 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 LBHD1Q9BQE6 289 aaPredicted RBP22.34■■□□□ 1.17
CPSF2-203ENST00000554290 TINF2Q9BSI4 451 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 FRMPD3Q5JV73 1810 aa22.34■■□□□ 1.17
CPSF2-203ENST00000554290 TSPY3P0CV98 308 aa22.33■■□□□ 1.17
CPSF2-203ENST00000554290 TSPY8P0CW00 308 aa22.33■■□□□ 1.17
CPSF2-203ENST00000554290 RTP1P59025 263 aa22.33■■□□□ 1.17
CPSF2-203ENST00000554290 GPR153Q6NV75 609 aa22.33■■□□□ 1.17
CPSF2-203ENST00000554290 NEDD1Q8NHV4 660 aa22.33■■□□□ 1.17
CPSF2-203ENST00000554290 DDX11Q96FC9 970 aa22.33■■□□□ 1.17
CPSF2-203ENST00000554290 PARP14Q460N5 1801 aa22.33■■□□□ 1.16
CPSF2-203ENST00000554290 GREB1LQ9C091 1923 aaPredicted RBP22.33■■□□□ 1.16
CPSF2-203ENST00000554290 RARBP10826 455 aa22.32■■□□□ 1.16
CPSF2-203ENST00000554290 MDM2Q00987 491 aaPredicted RBP22.32■■□□□ 1.16
CPSF2-203ENST00000554290 ANKRD45Q5TZF3 282 aa22.32■■□□□ 1.16
CPSF2-203ENST00000554290 SLC39A5Q6ZMH5 540 aa22.32■■□□□ 1.16
CPSF2-203ENST00000554290 GMCL1P1Q8NEA9 526 aa22.32■■□□□ 1.16
CPSF2-203ENST00000554290 FEM1BQ9UK73 627 aa22.32■■□□□ 1.16
CPSF2-203ENST00000554290 CNPY2Q9Y2B0 182 aa22.32■■□□□ 1.16
CPSF2-203ENST00000554290 ATP2A1O14983 1001 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms