RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 HMX2A2RU54 273 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 GNAT3A8MTJ3 354 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 METTL12A8MUP2 240 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 H3BRB1 525 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 ICMTO60725 284 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 HMOX1P09601 288 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 FDX2Q6P4F2 183 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 SLC51AQ86UW1 340 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 IL17REQ8NFR9 667 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 SYTL4Q96C24 671 aaPredicted RBP6.1□□□□□ -1.43
IFT43-207ENST00000554233 PHACTR3Q96KR7 559 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 MYRFLQ96LU7 910 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 USP26Q9BXU7 913 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 KCNF1Q9H3M0 494 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 TUT1Q9H6E5 874 aaKnown RBP6.1□□□□□ -1.43
IFT43-207ENST00000554233 C7orf69Q9H7B7 122 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
IFT43-207ENST00000554233 CCDC88AQ3V6T2 1871 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 ARFGEF2Q9Y6D5 1785 aa6.1□□□□□ -1.43
IFT43-207ENST00000554233 DICER1Q9UPY3 1922 aaKnown RBP6.09□□□□□ -1.43
IFT43-207ENST00000554233 ANKRD31Q8N7Z5 1873 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 HEG1Q9ULI3 1381 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 ANKRD36CQ5JPF3 1778 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 N4BP2Q86UW6 1770 aaPredicted RBP6.09□□□□□ -1.43
IFT43-207ENST00000554233 GSC2O15499 205 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 BRD1O95696 1058 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 TGFB1P01137 390 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 BMP3P12645 472 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 DDX10Q13206 875 aaKnown RBP6.09□□□□□ -1.43
IFT43-207ENST00000554233 ITPK1Q13572 414 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 ANKRD34AQ69YU3 496 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 B4GALNT3Q6L9W6 998 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 AMIGO3Q86WK7 504 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 GLYCTKQ8IVS8 523 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 LINC00116Q8NCU8 138 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 BHLHE41Q9C0J9 482 aaPredicted RBP6.09□□□□□ -1.43
IFT43-207ENST00000554233 LGR6Q9HBX8 967 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 EGFL7Q9UHF1 273 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 BRPF3Q9ULD4 1205 aa6.09□□□□□ -1.43
IFT43-207ENST00000554233 ESRRAP11474 423 aaPredicted RBP6.08□□□□□ -1.44
IFT43-207ENST00000554233 PRKAR2BP31323 418 aa6.08□□□□□ -1.44
IFT43-207ENST00000554233 NFIAQ12857 509 aa6.08□□□□□ -1.44
IFT43-207ENST00000554233 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.08□□□□□ -1.44
IFT43-207ENST00000554233 COL23A1Q86Y22 540 aaPredicted RBP6.08□□□□□ -1.44
IFT43-207ENST00000554233 FAM20CQ8IXL6 584 aa6.08□□□□□ -1.44
IFT43-207ENST00000554233 U2SURPO15042 1029 aaKnown RBP6.07□□□□□ -1.44
IFT43-207ENST00000554233 GAS2O43903 313 aaKnown RBP6.07□□□□□ -1.44
IFT43-207ENST00000554233 RPS6KA4O75676 772 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 MED26O95402 600 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 U2AF1L5P0DN76 240 aaPredicted RBP6.07□□□□□ -1.44
IFT43-207ENST00000554233 U2AF1Q01081 240 aaKnown RBP eCLIP6.07□□□□□ -1.44
IFT43-207ENST00000554233 GSTM4Q03013 218 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 ECM1Q16610 540 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 RNF43Q68DV7 783 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 BEND4Q6ZU67 534 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 CLEC10AQ8IUN9 316 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 FAM83CQ9BQN1 747 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
IFT43-207ENST00000554233 TFCP2L1Q9NZI6 479 aa6.07□□□□□ -1.44
IFT43-207ENST00000554233 A0A096LPE4 126 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 LOC100289279A0A1B0GTE1 492 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 A0A1W2PP55 124 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 A0A1W2PPZ6 126 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 MEGF11A6BM72 1044 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 COBLO75128 1261 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 DLGAP3O95886 979 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 CYP19A1P11511 503 aaPredicted RBP6.06□□□□□ -1.44
IFT43-207ENST00000554233 CD97P48960 835 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 SPRED3Q2MJR0 410 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 SGO2Q562F6 1265 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 USPL1Q5W0Q7 1092 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 INTS5Q6P9B9 1019 aaKnown RBP6.06□□□□□ -1.44
IFT43-207ENST00000554233 ZNF790Q6PG37 636 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 ZDHHC13Q8IUH4 622 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 GALNT12Q8IXK2 581 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 C12orf50Q8NA57 414 aaPredicted RBP6.06□□□□□ -1.44
IFT43-207ENST00000554233 DBNDD2Q9BQY9 259 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 LIN7BQ9HAP6 207 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 BABAM1Q9NWV8 329 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 FER1L6Q2WGJ9 1857 aa6.06□□□□□ -1.44
IFT43-207ENST00000554233 SOS1Q07889 1333 aaPredicted RBP6.05□□□□□ -1.44
IFT43-207ENST00000554233 CACNA1SQ13698 1873 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 ZBTB7AO95365 584 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 CRKLP46109 303 aaKnown RBP6.05□□□□□ -1.44
IFT43-207ENST00000554233 GRIA4P48058 902 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 ARHGAP4P98171 946 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 NFE2L2Q16236 605 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 SYT17Q9BSW7 474 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 TEX13AQ9BXU3 409 aaPredicted RBP6.05□□□□□ -1.44
IFT43-207ENST00000554233 TMPRSS13Q9BYE2 586 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 SOX17Q9H6I2 414 aaPredicted RBP6.05□□□□□ -1.44
IFT43-207ENST00000554233 CYP4F12Q9HCS2 524 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 LAMB2P55268 1798 aa6.05□□□□□ -1.44
IFT43-207ENST00000554233 MYH3P11055 1940 aa6.04□□□□□ -1.44
IFT43-207ENST00000554233 NDUFB5O43674 189 aa6.04□□□□□ -1.44
IFT43-207ENST00000554233 DRD2P14416 443 aa6.04□□□□□ -1.44
IFT43-207ENST00000554233 MAP4P27816 1152 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms