RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 BLIDQ8IZY5 108 aa13.9□□□□□ -0.18
LRP1-207ENST00000554174 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
LRP1-207ENST00000554174 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
LRP1-207ENST00000554174 NOL10Q9BSC4 688 aaKnown RBP13.9□□□□□ -0.18
LRP1-207ENST00000554174 DDX60LQ5H9U9 1706 aaKnown RBP13.9□□□□□ -0.19
LRP1-207ENST00000554174 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 GPR75-ASB3A0A0A6YYF3 556 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 ATP2B4P23634 1241 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 TRAPPC10P48553 1259 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 STX17P56962 302 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 ST5P78524 1137 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 NCBP1Q09161 790 aaKnown RBP13.89□□□□□ -0.19
LRP1-207ENST00000554174 CUL4BQ13620 913 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 MFSD14BQ5SR56 506 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 BLZF1Q9H2G9 400 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 TCP11L1Q9NUJ3 509 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 DACH1Q9UI36 760 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 LDHCP07864 332 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
LRP1-207ENST00000554174 CDK8P49336 464 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 RHBDL3P58872 404 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 TMEM139Q8IV31 216 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 TEX11Q8IYF3 940 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 TBC1D16Q8TBP0 767 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
LRP1-207ENST00000554174 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
LRP1-207ENST00000554174 FLT1P17948 1338 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 PSDA5PKW4 1024 aaPredicted RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 COBLO75128 1261 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 CALML3P27482 149 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 ERCC5P28715 1186 aaPredicted RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 TBX2Q13207 712 aaPredicted RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 HEATR3Q7Z4Q2 680 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 AMOTL1Q8IY63 956 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 SH3GLB2Q9NR46 395 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 PCDHA6Q9UN73 950 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 PCDHA8Q9Y5H6 950 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 STXBP3O00186 592 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 KCNJ6P48051 423 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 C16orf86Q6ZW13 317 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 APTXQ7Z2E3 356 aaKnown RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
LRP1-207ENST00000554174 GSDMAQ96QA5 445 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 EYA3Q99504 573 aa13.88□□□□□ -0.19
LRP1-207ENST00000554174 IGSF3O75054 1194 aa13.87□□□□□ -0.19
LRP1-207ENST00000554174 MYH1P12882 1939 aa13.87□□□□□ -0.19
LRP1-207ENST00000554174 C6orf229H3BNL8 230 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 TEX33O43247 280 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 BBOX1O75936 387 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 TRIM37O94972 964 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 HOXA10P31260 410 aaPredicted RBP13.86□□□□□ -0.19
LRP1-207ENST00000554174 ADKP55263 362 aaKnown RBP13.86□□□□□ -0.19
LRP1-207ENST00000554174 NR1I3Q14994 352 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 TMEM60Q9H2L4 133 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 GNAQP50148 359 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 KARSQ15046 597 aaKnown RBP13.86□□□□□ -0.19
LRP1-207ENST00000554174 INF2Q27J81 1249 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 SPATA1Q5VX52 437 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 SPECC1LQ69YQ0 1117 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 SYT10Q6XYQ8 523 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 TC2NQ8N9U0 490 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 KIF18AQ8NI77 898 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 CEP95Q96GE4 821 aa13.86□□□□□ -0.19
LRP1-207ENST00000554174 ZNF215Q9UL58 517 aaPredicted RBP13.86□□□□□ -0.19
LRP1-207ENST00000554174 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
LRP1-207ENST00000554174 A0A1B0GTH6 734 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 HSPA1LP34931 641 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 DHX8Q14562 1220 aaKnown RBP13.85□□□□□ -0.19
LRP1-207ENST00000554174 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 CCDC178Q5BJE1 867 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 ARL6IP4Q66PJ3 421 aaKnown RBP13.85□□□□□ -0.19
LRP1-207ENST00000554174 PROM2Q8N271 834 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 FAM163AQ96GL9 167 aaPredicted RBP13.85□□□□□ -0.19
LRP1-207ENST00000554174 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 GAKO14976 1311 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 CCDC194A0A1B0GVG4 234 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 FANCGO15287 622 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 NT5C2P49902 561 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 GTF2IP78347 998 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.85□□□□□ -0.192e-6■□□□□ 9.9
LRP1-207ENST00000554174 CTNND2Q9UQB3 1225 aa13.85□□□□□ -0.19
LRP1-207ENST00000554174 V9GYY5 206 aaPredicted RBP13.85□□□□□ -0.19
LRP1-207ENST00000554174 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
LRP1-207ENST00000554174 NRDCO43847 1150 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms