RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 LIMS2Q7Z4I7 341 aa4.41□□□□□ -1.7
LRFN5-204ENST00000554171 REM2Q8IYK8 340 aaPredicted RBP4.41□□□□□ -1.7
LRFN5-204ENST00000554171 CRISPLD2Q9H0B8 497 aa4.41□□□□□ -1.7
LRFN5-204ENST00000554171 ZHX3Q9H4I2 956 aa4.41□□□□□ -1.7
LRFN5-204ENST00000554171 SH2B1Q9NRF2 756 aaPredicted RBP4.41□□□□□ -1.7
LRFN5-204ENST00000554171 LMTK2Q8IWU2 1503 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 AK9Q5TCS8 1911 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 BCL9O00512 1426 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 HOXC11O43248 304 aaPredicted RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 ERLIN1O75477 346 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 GNAT1P11488 350 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 ALOX15P16050 662 aaPredicted RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 TBXAS1P24557 533 aaPredicted RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 NOS2P35228 1153 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 CASP2P42575 452 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 USP5P45974 858 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 SARSP49591 514 aaKnown RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 SEPHS1P49903 392 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 CDKN1CP49918 316 aaPredicted RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 SEPT7Q16181 437 aaKnown RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 AMHR2Q16671 573 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 BRDTQ58F21 947 aaPredicted RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 PPP4R3AQ6IN85 833 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 RANBP10Q6VN20 620 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 MFN1Q8IWA4 741 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 LRRC43Q8N309 656 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 PPP2R3CQ969Q6 453 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 ALG1Q9BT22 464 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 PPARGC1AQ9UBK2 798 aaKnown RBP4.4□□□□□ -1.7
LRFN5-204ENST00000554171 TCEAL9Q9UHQ7 104 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 PFDN2Q9UHV9 154 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 FBXO10Q9UK96 956 aa4.4□□□□□ -1.7
LRFN5-204ENST00000554171 TRAV6A0A075B6T7 132 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 A6NHS1 94 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 S100BP04271 92 aaPredicted RBP4.4□□□□□ -1.71
LRFN5-204ENST00000554171 CAPN3P20807 821 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TRAPPC10P48553 1259 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 C21orf58P58505 322 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 NR5A1Q13285 461 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 FUT11Q495W5 492 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 RSRC1Q96IZ7 334 aaKnown RBP4.4□□□□□ -1.71
LRFN5-204ENST00000554171 VPS50Q96JG6 964 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 CYP4F11Q9HBI6 524 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TMX2Q9Y320 296 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TMED5Q9Y3A6 229 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 CNTLNQ9NXG0 1405 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 SLC12A8A0AV02 714 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TMCO5BA8MYB1 307 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TSPAN6O43657 245 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 NEBLO76041 1014 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 GFPT2O94808 682 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TROVE2P10155 538 aaKnown RBP eCLIP4.4□□□□□ -1.71
LRFN5-204ENST00000554171 SERPINB3P29508 390 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 ETV3P41162 512 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 CD83Q01151 205 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 KRT71Q3SY84 523 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 TRAPPC3LQ5T215 181 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 ZNF598Q86UK7 904 aaKnown RBP4.4□□□□□ -1.71
LRFN5-204ENST00000554171 DGKHQ86XP1 1220 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 C10orf67Q8IYJ2 551 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 ANKS1AQ92625 1134 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 FATE1Q969F0 183 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 ZKSCAN4Q969J2 545 aaPredicted RBP4.4□□□□□ -1.71
LRFN5-204ENST00000554171 ABHD17AQ96GS6 310 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 SPATS2LQ9NUQ6 558 aaKnown RBP4.4□□□□□ -1.71
LRFN5-204ENST00000554171 COG5Q9UP83 839 aa4.4□□□□□ -1.71
LRFN5-204ENST00000554171 GREM1O60565 184 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 LARGE1O95461 756 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 KRT1P04264 644 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 GNAT2P19087 354 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 HNRNPH1P31943 449 aaKnown RBP4.39□□□□□ -1.71
LRFN5-204ENST00000554171 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRFN5-204ENST00000554171 SCRN1Q12765 414 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 RBBP5Q15291 538 aaKnown RBP4.39□□□□□ -1.71
LRFN5-204ENST00000554171 LRRC41Q15345 812 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 KMT5BQ4FZB7 885 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 C6orf132Q5T0Z8 1188 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 CFAP58Q5T655 872 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 OR7E24Q6IFN5 339 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 GIGYF2Q6Y7W6 1299 aaKnown RBP4.39□□□□□ -1.71
LRFN5-204ENST00000554171 OR8H2Q8N162 312 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 NPLOC4Q8TAT6 608 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 DDX12PQ92771 950 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 CARD11Q9BXL7 1154 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 SYNCQ9H7C4 482 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 KANSL2Q9H9L4 492 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 AASDHPPTQ9NRN7 309 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 MAFBQ9Y5Q3 323 aaPredicted RBP4.39□□□□□ -1.71
LRFN5-204ENST00000554171 GAPVD1Q14C86 1478 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 MUSKO15146 869 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 NDUFB5O43674 189 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 MXI1P50539 228 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 LRRC74AQ0VAA2 488 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 RABEP1Q15276 862 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 ZNF423Q2M1K9 1284 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 AARDQ4LEZ3 155 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 ODR4Q5SWX8 454 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 SNX32Q86XE0 403 aa4.39□□□□□ -1.71
LRFN5-204ENST00000554171 FAM20CQ8IXL6 584 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms