RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CCZ1BP86790 482 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 CCZ1P86791 482 aaPredicted RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 RILPL1Q5EBL4 403 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 CC2D1AQ6P1N0 951 aaPredicted RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 USP49Q70CQ1 688 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 DZIP1Q86YF9 867 aaKnown RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 EGFL6Q8IUX8 553 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 SRBD1Q8N5C6 995 aaKnown RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 CNBD1Q8NA66 436 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 BPIFA3Q9BQP9 254 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 HSD3B7Q9H2F3 369 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 KIAA1551Q9HCM1 1747 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 DLEC1Q9Y238 1755 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 ADAMTS3O15072 1205 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 PPP2R5AQ15172 486 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 SH3RF3Q8TEJ3 882 aaPredicted RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 DYNLL2Q96FJ2 89 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 PPP1R13BQ96KQ4 1090 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 PHF20Q9BVI0 1012 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 MCM9Q9NXL9 1143 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 AFF2P51816 1311 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 PCP11498 1178 aaKnown RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 BMP6P22004 513 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 AKAP17AQ02040 695 aaKnown RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 NPY5RQ15761 445 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 RCSD1Q6JBY9 416 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 TMTC3Q6ZXV5 915 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 PLEKHA4Q9H4M7 779 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 MKRN1Q9UHC7 482 aaKnown RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 PCDHA5Q9Y5H7 936 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 LAMB1P07942 1786 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 GPSM2P81274 684 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 PPP2R5BQ15173 497 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 CCDC88AQ3V6T2 1871 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 SBK1Q52WX2 424 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 RPAINQ86UA6 219 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 CNNM3Q8NE01 707 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 XPO4Q9C0E2 1151 aaKnown RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 PSD3Q9NYI0 1048 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 ARPP21Q9UBL0 812 aaPredicted RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 MAST2Q6P0Q8 1798 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 ATP1A3P13637 1013 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 MEX3CQ5U5Q3 659 aaKnown RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 TMED8Q6PL24 325 aaPredicted RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 GRAMD1CQ8IYS0 662 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 MED4Q9NPJ6 270 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 IFNKQ9P0W0 207 aa10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
AL049839.2-201ENST00000553947 POLR2DO15514 142 aaKnown RBP10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 DDAH1O94760 285 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 LDHBP07195 334 aaKnown RBP10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 GYS1P13807 737 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 GSDMDP57764 484 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 SUGP1Q8IWZ8 645 aaKnown RBP10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 PDILTQ8N807 584 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 CSRNP2Q9H175 543 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 IL17RBQ9NRM6 502 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 RBM28Q9NW13 759 aaKnown RBP10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 SERTAD1Q9UHV2 236 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 LEMD3Q9Y2U8 911 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 XDHP47989 1333 aa10.21□□□□□ -0.77
AL049839.2-201ENST00000553947 TSPY2A6NKD2 308 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 EFCAB8A8MWE9 144 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 PHACTR2O75167 634 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 SFPQP23246 707 aaKnown RBP eCLIP10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 KRT2P35908 639 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 CORO7P57737 925 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 PDE4BQ07343 736 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 CCDC93Q567U6 631 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 C12orf60Q5U649 245 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 E4F1Q66K89 784 aaPredicted RBP10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 TNFRSF25Q93038 417 aa10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 SRPRBQ9Y5M8 271 aaKnown RBP10.21□□□□□ -0.78
AL049839.2-201ENST00000553947 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 CALM1P0DP23 149 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 CALM2P0DP24 149 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 CALM3P0DP25 149 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 USP5P45974 858 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 ETF1P62495 437 aaKnown RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 TFAP4Q01664 338 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 SPTY2D1Q68D10 685 aaPredicted RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 IQUBQ8NA54 791 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 CEP89Q96ST8 783 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 A0A087X0B3 334 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 H3BQF6 201 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 GSCP56915 257 aaPredicted RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 SETQ01105 290 aaPredicted RBP10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 HSP90B2PQ58FF3 399 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 SLC44A5Q8NCS7 719 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 GIMAP7Q8NHV1 300 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 WDR66Q8TBY9 1149 aa10.2□□□□□ -0.78
AL049839.2-201ENST00000553947 TGFBRAP1Q8WUH2 860 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms